RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CEP135Q66GS9 1140 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 TMEM161BQ8NDZ6 487 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 NTPCRQ9BSD7 190 aaKnown RBP13.74□□□□□ -0.21
SRSF1-204ENST00000581979 KIFC3Q9BVG8 833 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 IKZF4Q9H2S9 585 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 AGPAT3Q9NRZ7 376 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.74□□□□□ -0.214e-17■■■□□ 14.8
SRSF1-204ENST00000581979 TRANK1O15050 2925 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 NRCAMQ92823 1304 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 DENND3A2RUS2 1198 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 TPM1P09493 284 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 LRMPQ12912 555 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 IKBKEQ14164 716 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 ARMCX5Q6P1M9 558 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 COL25A1Q9BXS0 654 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 NDST4Q9H3R1 872 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 SETD4Q9NVD3 440 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 TBX20Q9UMR3 447 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 A0A1W2PQC6 194 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 NRDCO43847 1150 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 POU3F3P20264 500 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 ABCD1P33897 745 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 ARL2P36404 184 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 DEFB103AP81534 67 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 TAP1Q03518 808 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 PCMTD1Q96MG8 357 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 CGNQ9P2M7 1197 aaKnown RBP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.73□□□□□ -0.21
SRSF1-204ENST00000581979 SIP14410 1827 aa13.73□□□□□ -0.21
SRSF1-204ENST00000581979 KAT6AQ92794 2004 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 TLL1O43897 1013 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 GAS2O43903 313 aaKnown RBP13.72□□□□□ -0.21
SRSF1-204ENST00000581979 ARHGEF15O94989 841 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 IGFBP4P22692 258 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 GLRA2P23416 452 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 NAMPTP43490 491 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 CYP2J2P51589 502 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 TRIM14Q14142 442 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 IER5Q5VY09 327 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 DBF4BQ8NFT6 615 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 CPLX3Q8WVH0 158 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 SUGCTQ9HAC7 445 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
SRSF1-204ENST00000581979 FRMD4BQ9Y2L6 1034 aa13.72□□□□□ -0.21
SRSF1-204ENST00000581979 ADGRA3Q8IWK6 1321 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 LRRIQ4A6NIV6 560 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 ZBTB42B2RXF5 422 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 AKR1B15C9JRZ8 316 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-204ENST00000581979 AKAP3O75969 853 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 GJB5O95377 273 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
SRSF1-204ENST00000581979 CASP4P49662 377 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 SNRPFP62306 86 aaKnown RBP13.71□□□□□ -0.21
SRSF1-204ENST00000581979 IGBP1P78318 339 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 GOLGA8FQ08AF8 430 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 GOLGA8DPQ0D2H9 430 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 FAM26DQ5JW98 314 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 MAP4K3Q8IVH8 894 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 TRIM59Q8IWR1 403 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 DMAC2Q9NW81 257 aa13.71□□□□□ -0.21
SRSF1-204ENST00000581979 MBLAC1A4D2B0 266 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 EXOC3O60645 756 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 SCP2P22307 547 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 STRN3Q13033 797 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 DRP2Q13474 957 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 SYCP1Q15431 976 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 TAF2Q6P1X5 1199 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 TMCO2Q7Z6W1 182 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 LRRC71Q8N4P6 559 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 BICD1Q96G01 975 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 RAD9AQ99638 391 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 MKNK1Q9BUB5 465 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 PCIF1Q9H4Z3 704 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 ARHGAP28Q9P2N2 729 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms