RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 HDAC7Q8WUI4 952 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 FGF14Q92915 247 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 TMEM87BQ96K49 555 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 MTA3Q9BTC8 594 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 OSBPL6Q9BZF3 934 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 PRKD2Q9BZL6 878 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 LTB4R2Q9NPC1 389 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 PDRG1Q9NUG6 133 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 ZDHHC7Q9NXF8 308 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.03□□□□□ -0.48
TOP3A-210ENST00000580713 ZFP37Q9Y6Q3 630 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-210ENST00000580713 USP24Q9UPU5 2620 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 ATRXP46100 2492 aa12.02□□□□□ -0.48
TOP3A-210ENST00000580713 MIA3Q5JRA6 1907 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 SLC30A4O14863 429 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 NCAM2O15394 837 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 LILRB5O75023 590 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 MCM2P49736 904 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 AFF1P51825 1210 aaKnown RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 PFKPQ01813 784 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 MTERF2Q49AM1 385 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 PRR16Q569H4 304 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 DHX32Q7L7V1 743 aaKnown RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 RHPN2Q8IUC4 686 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 NLRP4Q96MN2 994 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 IPO9Q96P70 1041 aaKnown RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 DDX23Q9BUQ8 820 aaKnown RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 DISC1Q9NRI5 854 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 SUCLA2Q9P2R7 463 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 SEPT9Q9UHD8 586 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 CDH7Q9ULB5 785 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 V9GY48 417 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-210ENST00000580713 ZFHX4Q86UP3 3567 aa12.02□□□□□ -0.49
TOP3A-210ENST00000580713 TGM5O43548 720 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 CHMP2AO43633 222 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 NR1I2O75469 434 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
TOP3A-210ENST00000580713 CYP3A4P08684 503 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 LIFRP42702 1097 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
TOP3A-210ENST00000580713 DSG1Q02413 1049 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 UGCGQ16739 394 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 RSPO2Q6UXX9 243 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-210ENST00000580713 PRR23BQ6ZRT6 265 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 TPRG1Q6ZUI0 275 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 MTSS1LQ765P7 747 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 GRASPQ7Z6J2 395 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-210ENST00000580713 ZNF410Q86VK4 478 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-210ENST00000580713 MARCH5Q9NX47 278 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-210ENST00000580713 ANGPTL2Q9UKU9 493 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 CNTNAP5Q8WYK1 1306 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 CNTNAP2Q9UHC6 1331 aa12.01□□□□□ -0.49
TOP3A-210ENST00000580713 K7ELQ4 463 aaPredicted RBP12□□□□□ -0.49
TOP3A-210ENST00000580713 ZMYND10O75800 440 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
TOP3A-210ENST00000580713 NTHL1P78549 312 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 FGD1P98174 961 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 EXOSC10Q01780 885 aaKnown RBP12□□□□□ -0.49
TOP3A-210ENST00000580713 ANKRD1Q15327 319 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 Q6ZUG5 572 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 MRPL10Q7Z7H8 261 aaKnown RBP12□□□□□ -0.49
TOP3A-210ENST00000580713 KSR1Q8IVT5 923 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 B3GALT6Q96L58 329 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 NELL2Q99435 816 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 KXD1Q9BQD3 176 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 SH2D3AQ9BRG2 576 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 PHF20Q9BVI0 1012 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 FAM126AQ9BYI3 521 aaPredicted RBP12□□□□□ -0.49
TOP3A-210ENST00000580713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12□□□□□ -0.49
TOP3A-210ENST00000580713 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
TOP3A-210ENST00000580713 BARHL2Q9NY43 387 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 POLIQ9UNA4 740 aa12□□□□□ -0.49
TOP3A-210ENST00000580713 hCG_1984214I3L0E3 225 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 ITGA4P13612 1032 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 RPL17P18621 184 aaKnown RBP11.99□□□□□ -0.49
TOP3A-210ENST00000580713 NRLP54845 237 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 TARBP2Q15633 366 aaKnown RBP11.99□□□□□ -0.49
TOP3A-210ENST00000580713 LAIR1Q6GTX8 287 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 ZNF852Q6ZMS4 543 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 COLGALT2Q8IYK4 626 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 ZNF713Q8N859 430 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-210ENST00000580713 NELL1Q92832 810 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 FGF13Q92913 245 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 CLDN23Q96B33 292 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 COLEC11Q9BWP8 271 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-210ENST00000580713 AGPAT5Q9NUQ2 364 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 MRPS17Q9Y2R5 130 aaKnown RBP11.99□□□□□ -0.49
TOP3A-210ENST00000580713 COL4A3Q01955 1670 aa11.99□□□□□ -0.49
TOP3A-210ENST00000580713 FAM208BQ5VWN6 2430 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 TMEM150BA6NC51 233 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms