RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 H0YCG3 227 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 K7ENM7 598 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 F13A1P00488 732 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 HARSP12081 509 aaKnown RBP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 GTF2F1P35269 517 aaKnown RBP eCLIP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 STAT6P42226 847 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 MATR3P43243 847 aaKnown RBP eCLIP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 OR1G1P47890 313 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 SLC11A1P49279 550 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 GRIK3Q13003 919 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 MAPK7Q13164 816 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 MCM6Q14566 821 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 CLUL1Q15846 466 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 ZNF280BQ86YH2 543 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 BICD1Q96G01 975 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 EPSTI1Q96J88 318 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 CLIC6Q96NY7 704 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 UHRF1Q96T88 793 aaPredicted RBP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 REEP2Q9BRK0 252 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 TCHPQ9BT92 498 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 CCSER1Q9C0I3 900 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 RNF39Q9H2S5 420 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 ARHGAP28Q9P2N2 729 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 ANKFY1Q9P2R3 1169 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 FAM50BQ9Y247 325 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 USP20Q9Y2K6 914 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 FAN1Q9Y2M0 1017 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 GDAQ9Y2T3 454 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
NDEL1-208ENST00000580237 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 UNC80Q8N2C7 3258 aa11.98□□□□□ -0.49
NDEL1-208ENST00000580237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 PER2O15055 1255 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 SPTLC2O15270 562 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 RECQL4O94761 1208 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 DDHD2O94830 711 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 EDN1P05305 212 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 GALTP07902 379 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 NASPP49321 788 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 AFF1P51825 1210 aaKnown RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 YARSP54577 528 aaKnown RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 ERVFC1P60507 584 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 SLC39A14Q15043 492 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 LEXMQ3ZCV2 418 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 RRAGBQ5VZM2 374 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 EEF1DP3Q658K8 133 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 PTCRAQ6ISU1 281 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 TMEM173Q86WV6 379 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 VPS52Q8N1B4 723 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 MYCT1Q8N699 235 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 SPIRE2Q8WWL2 714 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 IGSF21Q96ID5 467 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 CDCA3Q99618 268 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 CCDC94Q9BW85 323 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 TMEM134Q9H6X4 195 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 PARVGQ9HBI0 331 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 BLOC1S4Q9NUP1 217 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-208ENST00000580237 TNFSF13BQ9Y275 285 aa11.97□□□□□ -0.49
NDEL1-208ENST00000580237 REV3LO60673 3130 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 FSCN2O14926 492 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 LINC01565O15544 149 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 B4GALT3O60512 393 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 TBX10O75333 385 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 YEATS4O95619 227 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 ALDH2P05091 517 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 URODP06132 367 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 BECN1Q14457 450 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 DUSP6Q16828 381 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 NT5DC1Q5TFE4 455 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 LLGL2Q6P1M3 1020 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 USP49Q70CQ1 688 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 EFHBQ8N7U6 833 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 TARS2Q9BW92 718 aaKnown RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 TOPORSQ9NS56 1045 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 TFIP11Q9UBB9 837 aaKnown RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 STK39Q9UEW8 545 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 CD207Q9UJ71 328 aa11.96□□□□□ -0.49
NDEL1-208ENST00000580237 BARX2Q9UMQ3 279 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-208ENST00000580237 HIDE1A8MVS5 230 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 NRP1O14786 923 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
NDEL1-208ENST00000580237 INPPL1O15357 1258 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 BMP1P13497 986 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 LIG4P49917 911 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 OSTNP61366 133 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 GIT2Q14161 759 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
NDEL1-208ENST00000580237 COL19A1Q14993 1142 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 GLRA4Q5JXX5 417 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms