RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SCNN1GP51170 649 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 PALB2Q86YC2 1186 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 SNX27Q96L92 541 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 TTC12Q9H892 705 aaPredicted RBP19.86■□□□□ 0.77
MKS1-209ENST00000580127 CHST7Q9NS84 486 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 ZDHHC7Q9NXF8 308 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 EPS15L1Q9UBC2 864 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 PARP2Q9UGN5 583 aa19.86■□□□□ 0.77
MKS1-209ENST00000580127 ZFP37Q9Y6Q3 630 aaPredicted RBP19.86■□□□□ 0.77
MKS1-209ENST00000580127 CLUHO75153 1309 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 MTCL1Q9Y4B5 1905 aaKnown RBP19.85■□□□□ 0.77
MKS1-209ENST00000580127 PRR23AA6NEV1 266 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 ARF4P18085 180 aaPredicted RBP19.85■□□□□ 0.77
MKS1-209ENST00000580127 ARL2P36404 184 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 TXKP42681 527 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 MBTD1Q05BQ5 628 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 SPIRE1Q08AE8 756 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 GRIK3Q13003 919 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 CCDC105Q8IYK2 499 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 DTWD2Q8NBA8 298 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 RIN2Q8WYP3 895 aaPredicted RBP19.85■□□□□ 0.77
MKS1-209ENST00000580127 ZFP42Q96MM3 310 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 SEMA4AQ9H3S1 761 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 XPNPEP1Q9NQW7 623 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 MARCH5Q9NX47 278 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 ADAM28Q9UKQ2 775 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 TPCN1Q9ULQ1 816 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 HES2Q9Y543 173 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 DENND4AQ7Z401 1863 aa19.85■□□□□ 0.77
MKS1-209ENST00000580127 ZMYM2Q9UBW7 1377 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 FAM186AA6NE01 2351 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 A0A1B0GUA9 196 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
MKS1-209ENST00000580127 SPATA31D3P0C874 917 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 CAPSQ13938 189 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 TMEM132AQ24JP5 1023 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 FUT10Q6P4F1 479 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 SPATA31D4Q6ZUB0 917 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 ASCL5Q7RTU5 278 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 FRMD5Q7Z6J6 570 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 ZBTB8OSQ8IWT0 167 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 RNF168Q8IYW5 571 aaPredicted RBP19.84■□□□□ 0.77
MKS1-209ENST00000580127 SLC44A3Q8N4M1 653 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 MCPH1Q8NEM0 835 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 PRIMPOLQ96LW4 560 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 NT5C3AQ9H0P0 336 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 MIOSQ9NXC5 875 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 C2orf16Q68DN1 1984 aa19.84■□□□□ 0.77
MKS1-209ENST00000580127 NEMFO60524 1076 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 NPTXRO95502 500 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 EFEMP2O95967 443 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 CFHP08603 1231 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 SRFP11831 508 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 NPR3P17342 541 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 AKAP5P24588 427 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 ANAPC15P60006 121 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 ANGPT1Q15389 498 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 PDXDC1Q6P996 788 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 ASAP3Q8TDY4 903 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 PRKD2Q9BZL6 878 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 C2orf40Q9H1Z8 148 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 NXF3Q9H4D5 531 aaKnown RBP19.83■□□□□ 0.77
MKS1-209ENST00000580127 GJB4Q9NTQ9 266 aa19.83■□□□□ 0.77
MKS1-209ENST00000580127 PRMT7Q9NVM4 692 aaPredicted RBP19.83■□□□□ 0.77
MKS1-209ENST00000580127 SF3B1O75533 1304 aaKnown RBP eCLIP19.82■□□□□ 0.76
MKS1-209ENST00000580127 LRRIQ4A6NIV6 560 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 TGM5O43548 720 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 PI15O43692 258 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 RFPL2O75678 378 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 LAMP2P13473 410 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 GLRA2P23416 452 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 RARRES1P49788 294 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 ELAVL2Q12926 359 aaKnown RBP19.82■□□□□ 0.76
MKS1-209ENST00000580127 NR5A1Q13285 461 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 CWF19L1Q69YN2 538 aaKnown RBP19.82■□□□□ 0.76
MKS1-209ENST00000580127 SHDQ96IW2 340 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 NACC1Q96RE7 527 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 GPR62Q9BZJ7 368 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 POLR3FQ9H1D9 316 aaPredicted RBP19.82■□□□□ 0.76
MKS1-209ENST00000580127 PLXNA3P51805 1871 aa19.82■□□□□ 0.76
MKS1-209ENST00000580127 MYBP10242 640 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 ATP2B1P20020 1258 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 TUSC3Q13454 348 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 HSP90AA2PQ14568 343 aaPredicted RBP19.81■□□□□ 0.76
MKS1-209ENST00000580127 SAFBQ15424 915 aaKnown RBP eCLIP19.81■□□□□ 0.76
MKS1-209ENST00000580127 AMHR2Q16671 573 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 EARS2Q5JPH6 523 aaKnown RBP19.81■□□□□ 0.76
MKS1-209ENST00000580127 LIN9Q5TKA1 542 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 KCNG4Q8TDN1 519 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 PIGOQ8TEQ8 1089 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 ADPGKQ9BRR6 497 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 KLK14Q9P0G3 267 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 ARID2Q68CP9 1835 aa19.81■□□□□ 0.76
MKS1-209ENST00000580127 N4BP3O15049 544 aa19.8■□□□□ 0.76
MKS1-209ENST00000580127 ZMYND10O75800 440 aa19.8■□□□□ 0.76
MKS1-209ENST00000580127 PAPLNO95428 1278 aa19.8■□□□□ 0.76
MKS1-209ENST00000580127 THP07101 528 aa19.8■□□□□ 0.76
MKS1-209ENST00000580127 HNRNPA1P09651 372 aaKnown RBP eCLIP19.8■□□□□ 0.76
MKS1-209ENST00000580127 LILRA6Q6PI73 481 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms