RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 APBB1IPQ7Z5R6 666 aaPredicted RBP24.9■■□□□ 1.58
NDEL1-207ENST00000580012 LPPQ93052 612 aa24.9■■□□□ 1.58
NDEL1-207ENST00000580012 CCDC47Q96A33 483 aaKnown RBP24.9■■□□□ 1.58
NDEL1-207ENST00000580012 CASD1Q96PB1 797 aa24.9■■□□□ 1.58
NDEL1-207ENST00000580012 IKZF4Q9H2S9 585 aa24.9■■□□□ 1.58
NDEL1-207ENST00000580012 NXF3Q9H4D5 531 aaKnown RBP24.9■■□□□ 1.58
NDEL1-207ENST00000580012 HES2Q9Y543 173 aa24.9■■□□□ 1.58
NDEL1-207ENST00000580012 A0A0B4J269 797 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 HNRNPDLO14979 420 aaKnown RBP24.89■■□□□ 1.58
NDEL1-207ENST00000580012 INPPL1O15357 1258 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 OFD1O75665 1012 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 FGFR1P11362 822 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 RSPH1Q8WYR4 309 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 ERCC4Q92889 916 aaPredicted RBP24.89■■□□□ 1.58
NDEL1-207ENST00000580012 BICD1Q96G01 975 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 TCHPQ9BT92 498 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 TRIM6Q9C030 488 aaPredicted RBP24.89■■□□□ 1.58
NDEL1-207ENST00000580012 TMEM117Q9H0C3 514 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 UBN1Q9NPG3 1134 aa24.89■■□□□ 1.58
NDEL1-207ENST00000580012 UBE4BO95155 1302 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 CLDN3O15551 220 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 ITGA4P13612 1032 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 ADSSP30520 456 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 GRM5P41594 1212 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 GATMP50440 423 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 ZNF568Q3ZCX4 644 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 SLFN12LQ6IEE8 588 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 CMTR2Q8IYT2 770 aaKnown RBP24.88■■□□□ 1.57
NDEL1-207ENST00000580012 RNF169Q8NCN4 708 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 SMARCE1Q969G3 411 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 YME1L1Q96TA2 773 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 CLSTN2Q9H4D0 955 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 RMND1Q9NWS8 449 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 MSRAQ9UJ68 235 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 GIT1Q9Y2X7 761 aa24.88■■□□□ 1.57
NDEL1-207ENST00000580012 LCHNA4D1U4 455 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 TISP43B9A030 160 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 TGFB1I1O43294 461 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 FAM189A1O60320 539 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 IBSPP21815 317 aaPredicted RBP24.87■■□□□ 1.57
NDEL1-207ENST00000580012 ZBTB33Q86T24 672 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 HACE1Q8IYU2 909 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 SNTG2Q9NY99 539 aa24.87■■□□□ 1.57
NDEL1-207ENST00000580012 ZMYM2Q9UBW7 1377 aa24.86■■□□□ 1.57
NDEL1-207ENST00000580012 DNAJB2P25686 324 aa24.86■■□□□ 1.57
NDEL1-207ENST00000580012 SNRPFP62306 86 aaKnown RBP24.86■■□□□ 1.57
NDEL1-207ENST00000580012 NOLC1Q14978 699 aaKnown RBP eCLIP24.86■■□□□ 1.57
NDEL1-207ENST00000580012 KNOP1Q1ED39 458 aaKnown RBP24.86■■□□□ 1.57
NDEL1-207ENST00000580012 RSAD1Q9HA92 442 aa24.86■■□□□ 1.57
NDEL1-207ENST00000580012 ARHGEF15O94989 841 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 CA3P07451 260 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 LINC00271P0C7V0 271 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 AKAP5P24588 427 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 CAMK4Q16566 473 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 COBLL1Q53SF7 1204 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 GLB1LQ6UWU2 654 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 LRRC55Q6ZSA7 311 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 SYCP3Q8IZU3 236 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 CEP120Q8N960 986 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 GSTCDQ8NEC7 633 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 HELQQ8TDG4 1101 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 TIFAQ96CG3 184 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 GTPBP4Q9BZE4 634 aaKnown RBP24.85■■□□□ 1.57
NDEL1-207ENST00000580012 GBP3Q9H0R5 595 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 NKX2-4Q9H2Z4 354 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 KIAA1468Q9P260 1216 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 ANKFY1Q9P2R3 1169 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 MAN1B1Q9UKM7 699 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 GDAQ9Y2T3 454 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 COL4A6Q14031 1691 aa24.85■■□□□ 1.57
NDEL1-207ENST00000580012 LINC01553A4QN01 128 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 TBKBP1A7MCY6 615 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 GARTP22102 1010 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 AFF1P51825 1210 aaKnown RBP24.84■■□□□ 1.57
NDEL1-207ENST00000580012 TAP1Q03518 808 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 BTG3Q14201 252 aaPredicted RBP24.84■■□□□ 1.57
NDEL1-207ENST00000580012 XKR4Q5GH76 650 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 NOMO2Q5JPE7 1267 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 ZNF658Q5TYW1 1059 aaPredicted RBP24.84■■□□□ 1.57
NDEL1-207ENST00000580012 ALKAL1Q6UXT8 129 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 GUF1Q8N442 669 aaKnown RBP24.84■■□□□ 1.57
NDEL1-207ENST00000580012 TMEM174Q8WUU8 243 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 CLP1Q92989 425 aaKnown RBP24.84■■□□□ 1.57
NDEL1-207ENST00000580012 GAD1Q99259 594 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 KCTD10Q9H3F6 313 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 MYH11P35749 1972 aa24.84■■□□□ 1.57
NDEL1-207ENST00000580012 LAMA2P24043 3122 aaKnown RBP24.83■■□□□ 1.57
NDEL1-207ENST00000580012 ARL5CA6NH57 179 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 OGTO15294 1046 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 MEFVO15553 781 aaPredicted RBP24.83■■□□□ 1.57
NDEL1-207ENST00000580012 RECQL4O94761 1208 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 MBD3O95983 291 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 POU5F1Q01860 360 aaKnown RBP24.83■■□□□ 1.57
NDEL1-207ENST00000580012 KYAT1Q16773 422 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 GPR153Q6NV75 609 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 NELFCDQ8IXH7 590 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 TMEM192Q8IY95 271 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 THNSL1Q8IYQ7 743 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 ABI1Q8IZP0 508 aa24.83■■□□□ 1.57
NDEL1-207ENST00000580012 MSTO1Q9BUK6 570 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms