RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 SPATA6Q9NWH7 488 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NID2Q14112 1375 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TMEM150BA6NC51 233 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ZMYND10O75800 440 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.238e-6■□□□□ 10.1
CDK5RAP3-216ENST00000579853 SPATA31D3P0C874 917 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SRGAP2CP0DJJ0 459 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GLULP15104 373 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 QARSP47897 775 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 UBXN11Q5T124 520 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NOTUMQ6P988 496 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 LILRA6Q6PI73 481 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MOXD1Q6UVY6 613 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SPATA31D4Q6ZUB0 917 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 DDX23Q9BUQ8 820 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CDH7Q9ULB5 785 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 IPPQ9Y573 584 aa13.63□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TDRD15B5MCY1 1934 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NCAM2O15394 837 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MLH1P40692 756 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NLRP5P59047 1200 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GPC5P78333 572 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MLF2Q15773 248 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MAML2Q8IZL2 1156 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FGF14Q92915 247 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CEP170P1Q96L14 293 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MBOAT7Q96N66 472 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GAD1Q99259 594 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NELL2Q99435 816 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FAM126AQ9BYI3 521 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MINDY3Q9H8M7 445 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ZSCAN32Q9NX65 697 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ADAM28Q9UKQ2 775 aa13.62□□□□□ -0.23
CDK5RAP3-216ENST00000579853 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MYH15Q9Y2K3 1946 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 POTEMA6NI47 508 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 EDIL3O43854 480 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 XYLBO75191 536 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 P4HBP07237 508 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MYBP10242 640 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 IFNAR1P17181 557 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 HOXA9P31269 272 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SCNN1GP51170 649 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CSTF1Q05048 431 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MXD4Q14582 209 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 UBXN2BQ14CS0 331 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SLC44A4Q53GD3 710 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ZBTB41Q5SVQ8 909 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PLA2G4FQ68DD2 849 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 OTUD6AQ7L8S5 288 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RNF149Q8NC42 400 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ZBTB44Q8NCP5 570 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ETNPPLQ8TBG4 499 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GJA10Q969M2 543 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RTKNQ9BST9 563 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TRIM6Q9C030 488 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CSRNP2Q9H175 543 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 EPC1Q9H2F5 836 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CDV3Q9UKY7 258 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FAM170BA6NMN3 283 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TBC1D4O60343 1298 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TDP2O95551 362 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ATXN1P54253 815 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NPEPPSP55786 919 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 POU5F1BQ06416 359 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GALNT17Q6IS24 598 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PDXDC1Q6P996 788 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 Q6ZUG5 572 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FBXL16Q8N461 479 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 BRF1Q92994 677 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TMEM143Q96AN5 459 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FAM20AQ96MK3 541 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 LTB4R2Q9NPC1 389 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FBXW11Q9UKB1 542 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PCDHA4Q9UN74 947 aa13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SMG5Q9UPR3 1016 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDK5RAP3-216ENST00000579853 BAHCC1Q9P281 2608 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 LRRN2O75325 713 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TADA2AO75478 443 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms