RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 TRIM29Q14134 588 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 GIT2Q14161 759 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 TFDP1Q14186 410 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 MXD4Q14582 209 aaPredicted RBP9.92□□□□□ -0.82
GGA3-207ENST00000578896 NOTUMQ6P988 496 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 GPR149Q86SP6 731 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 GSTCDQ8NEC7 633 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 BSNDQ8WZ55 320 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 RPS6KC1Q96S38 1066 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 PAAF1Q9BRP4 392 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 HERC2P3Q9BVR0 1158 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 GPR62Q9BZJ7 368 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 TRIM6Q9C030 488 aaPredicted RBP9.92□□□□□ -0.82
GGA3-207ENST00000578896 MAN1C1Q9NR34 630 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 ANKEF1Q9NU02 776 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 SORCS3Q9UPU3 1222 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 CCDC195A0A1B0GUA6 201 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 EDN1P05305 212 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 URODP06132 367 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 AXLP30530 894 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 GLUD2P49448 558 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 DSC1Q08554 894 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 NCBP1Q09161 790 aaKnown RBP9.91□□□□□ -0.82
GGA3-207ENST00000578896 MTMR3Q13615 1198 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 NBR1Q14596 966 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 KIAA0319Q5VV43 1072 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
GGA3-207ENST00000578896 ZDHHC14Q8IZN3 488 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 CNNM3Q8NE01 707 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 HASPINQ8TF76 798 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 RSAD2Q8WXG1 361 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 ATOH1Q92858 354 aaPredicted RBP9.91□□□□□ -0.82
GGA3-207ENST00000578896 SFXN1Q9H9B4 322 aa9.91□□□□□ -0.82
GGA3-207ENST00000578896 CACNA1IQ9P0X4 2223 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 A0A1B0GUA9 196 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 CASTOR2A6NHX0 329 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 INPPL1O15357 1258 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 NARSO43776 548 aaKnown RBP9.9□□□□□ -0.82
GGA3-207ENST00000578896 N4BP1O75113 896 aaKnown RBP9.9□□□□□ -0.82
GGA3-207ENST00000578896 EFEMP2O95967 443 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 IGFBP6P24592 240 aaPredicted RBP9.9□□□□□ -0.82
GGA3-207ENST00000578896 ECM1Q16610 540 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 PRSS55Q6UWB4 352 aaPredicted RBP9.9□□□□□ -0.82
GGA3-207ENST00000578896 CCDC149Q6ZUS6 474 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 RNF168Q8IYW5 571 aaPredicted RBP9.9□□□□□ -0.82
GGA3-207ENST00000578896 FLCNQ8NFG4 579 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 RIN2Q8WYP3 895 aaPredicted RBP9.9□□□□□ -0.82
GGA3-207ENST00000578896 RSPH1Q8WYR4 309 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 CCDC51Q96ER9 411 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 KIFC3Q9BVG8 833 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 COLEC11Q9BWP8 271 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 UBN1Q9NPG3 1134 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 SNTG2Q9NY99 539 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 GIT1Q9Y2X7 761 aa9.9□□□□□ -0.82
GGA3-207ENST00000578896 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 PI15O43692 258 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 TADA2AO75478 443 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 GLUD1P00367 558 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 ADH1AP07327 375 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 GBP2P32456 591 aaPredicted RBP9.89□□□□□ -0.83
GGA3-207ENST00000578896 DSG1Q02413 1049 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 POU5F1BQ06416 359 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 EEF1DP3Q658K8 133 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 FUT10Q6P4F1 479 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 OTOP3Q7RTS5 596 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 ZNF707Q96C28 371 aaPredicted RBP9.89□□□□□ -0.83
GGA3-207ENST00000578896 ACSF2Q96CM8 615 aaPredicted RBP9.89□□□□□ -0.83
GGA3-207ENST00000578896 C8orf76Q96K31 380 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 NACC1Q96RE7 527 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 MYADMQ96S97 322 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 MFSD1Q9H3U5 465 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 FZD8Q9H461 694 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 PDZD7Q9H5P4 517 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 KCNK12Q9HB15 430 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 RXFP1Q9HBX9 757 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 USTQ9Y2C2 406 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 GVINP1Q7Z2Y8 2422 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 VWA8A3KMH1 1905 aa9.89□□□□□ -0.83
GGA3-207ENST00000578896 ARHGEF35A5YM69 484 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 TGM5O43548 720 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 NR1I2O75469 434 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 PRKCBP05771 671 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 CFHP08603 1231 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 OR52Z1P0C646 297 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 XRCC6P12956 609 aaKnown RBP eCLIP9.88□□□□□ -0.83
GGA3-207ENST00000578896 SAFBQ15424 915 aaKnown RBP eCLIP9.88□□□□□ -0.83
GGA3-207ENST00000578896 USP41Q3LFD5 358 aa9.88□□□□□ -0.83
GGA3-207ENST00000578896 RTP2Q5QGT7 225 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms