RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 C12orf50Q8NA57 414 aaPredicted RBP7.04□□□□□ -1.28
UBB-208ENST00000578706 GLIS3Q8NEA6 775 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 GTF3C6Q969F1 213 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 NELL2Q99435 816 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 SDF4Q9BRK5 362 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 LARP6Q9BRS8 491 aaKnown RBP7.04□□□□□ -1.28
UBB-208ENST00000578706 MRPL9Q9BYD2 267 aaKnown RBP7.04□□□□□ -1.28
UBB-208ENST00000578706 PLA2G2FQ9BZM2 168 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 PSTPIP2Q9H939 334 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 GRPEL1Q9HAV7 217 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 JADE2Q9NQC1 790 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 SLC9A2Q9UBY0 812 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 CDH7Q9ULB5 785 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 NDRG2Q9UN36 371 aaKnown RBP7.04□□□□□ -1.28
UBB-208ENST00000578706 MTMR6Q9Y217 621 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 KIF3AQ9Y496 699 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 NEUROG3Q9Y4Z2 214 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 UBIAD1Q9Y5Z9 338 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 TAF6LQ9Y6J9 622 aa7.04□□□□□ -1.28
UBB-208ENST00000578706 PDCD11Q14690 1871 aaKnown RBP7.04□□□□□ -1.28
UBB-208ENST00000578706 ERICH2A1L162 156 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 CARNS1A5YM72 827 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 SPDYE3A6NKU9 549 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 C2CD2LO14523 706 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 BACH1O14867 736 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 NCAM2O15394 837 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 HBP1O60381 514 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 PFKFB2O60825 505 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 GLUD1P00367 558 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 VTNP04004 478 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 PLA2G2AP14555 144 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 FSHRP23945 695 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 CNR2P34972 360 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 RAP1GAPP47736 663 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 CCR3P51677 355 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 PFKPQ01813 784 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 TRDNQ13061 729 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 ZNF484Q5JVG2 852 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 FOXD4L5Q5VV16 416 aaPredicted RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 FAM160B1Q5W0V3 765 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 RNF43Q68DV7 783 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 HEATR6Q6AI08 1181 aaKnown RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 CAVIN1Q6NZI2 390 aaKnown RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 ELMSAN1Q6PJG2 1045 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 LONP2Q86WA8 852 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 ZNF280BQ86YH2 543 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 RNF168Q8IYW5 571 aaPredicted RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 NECAB1Q8N987 351 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 GPT2Q8TD30 523 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 FGF13Q92913 245 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 LPPQ93052 612 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 RRP36Q96EU6 259 aaKnown RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 ZNF274Q96GC6 653 aaPredicted RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 RPS6KC1Q96S38 1066 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 HNRNPABQ99729 332 aaKnown RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 PRKD2Q9BZL6 878 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 KCNH7Q9NS40 1196 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 MARCH5Q9NX47 278 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 SEC63Q9UGP8 760 aaKnown RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 MSRB2Q9Y3D2 182 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 ZFP37Q9Y6Q3 630 aaPredicted RBP7.03□□□□□ -1.28
UBB-208ENST00000578706 NUP205Q92621 2012 aa7.03□□□□□ -1.28
UBB-208ENST00000578706 SHROOM3Q8TF72 1996 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 PLXNB3Q9ULL4 1909 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 VPS37CA5D8V6 355 aaPredicted RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 C4orf47A7E2U8 309 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 NRG2O14511 850 aaPredicted RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 IFIT3O14879 490 aaKnown RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 DDHD2O94830 711 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 PAPSS2O95340 614 aaPredicted RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 ATG7O95352 703 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 C22orf31O95567 290 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 ADH1AP07327 375 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 CHRNB1P11230 501 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 XRCC6P12956 609 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBB-208ENST00000578706 EIF4BP23588 611 aaKnown RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 MCM5P33992 734 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 CXCL12P48061 93 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 AFF1P51825 1210 aaKnown RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 EVCP57679 992 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 ZSCAN23Q3MJ62 389 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 LONRF3Q496Y0 759 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 LILRA6Q6PI73 481 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 MTSS1LQ765P7 747 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 GRASPQ7Z6J2 395 aaPredicted RBP7.02□□□□□ -1.29
UBB-208ENST00000578706 CATIPQ7Z7H3 387 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 KBTBD6Q86V97 674 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 METTL13Q8N6R0 699 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 NCOA7Q8NI08 942 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 ITFG1Q8TB96 612 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 RSPH1Q8WYR4 309 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 BRF1Q92994 677 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 PHKBQ93100 1093 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 TCEANC2Q96MN5 208 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 PHF20Q9BVI0 1012 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 ADAMTS10Q9H324 1103 aa7.02□□□□□ -1.29
UBB-208ENST00000578706 PIDD1Q9HB75 910 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms