RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 HERC4Q5GLZ8 1057 aaPredicted RBP15.02■□□□□ -0
CSNK1D-208ENST00000578501 ATL3Q6DD88 541 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 RASSF8Q8NHQ8 419 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 LRRC15Q8TF66 581 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 ADPGKQ9BRR6 497 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 TMEM175Q9BSA9 504 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 RNF39Q9H2S5 420 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 NXF3Q9H4D5 531 aaKnown RBP15.02■□□□□ -0
CSNK1D-208ENST00000578501 CCDC39Q9UFE4 941 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 HES2Q9Y543 173 aa15.02■□□□□ -0
CSNK1D-208ENST00000578501 SFI1A8K8P3 1242 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 H0YCG3 227 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 ZC3H11AO75152 810 aaKnown RBP eCLIP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 F13A1P00488 732 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 IRS1P35568 1242 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 TXLNAP40222 546 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 PBX3P40426 434 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 SMTNP53814 917 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 HYAL1Q12794 435 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 STK38Q15208 465 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 DCAF4L1Q3SXM0 396 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 SPECC1Q5M775 1068 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 NT5DC1Q5TFE4 455 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 USP49Q70CQ1 688 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 APBB1IPQ7Z5R6 666 aaPredicted RBP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 BMP8AQ7Z5Y6 402 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 CDR2LQ86X02 465 aaPredicted RBP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 LARP4BQ92615 738 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 CLIC6Q96NY7 704 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 FAM193BQ96PV7 902 aaPredicted RBP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 GAD1Q99259 594 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 NGRNQ9NPE2 291 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 LARSQ9P2J5 1176 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 STK17AQ9UEE5 414 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 STK39Q9UEW8 545 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 TNFSF13BQ9Y275 285 aa15.01□□□□□ -0.01
CSNK1D-208ENST00000578501 PLXNA4Q9HCM2 1894 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 FSD2A1L4K1 749 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 SPTLC2O15270 562 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 DDHD2O94830 711 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 POMCP01189 267 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 ALDH2P05091 517 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 EDN1P05305 212 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 MLH1P40692 756 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 ZNF131P52739 623 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 ERVFC1P60507 584 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 DSC1Q08554 894 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 RAD51AP2Q09MP3 1159 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 MCM6Q14566 821 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 SMAD2Q15796 467 aaKnown RBP15□□□□□ -0.01
CSNK1D-208ENST00000578501 TMEM132AQ24JP5 1023 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 ATF7IP2Q5U623 682 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 TAS1R3Q7RTX0 852 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 DDX53Q86TM3 631 aaKnown RBP15□□□□□ -0.01
CSNK1D-208ENST00000578501 GPBP1Q86WP2 473 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 ZNF280BQ86YH2 543 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 TMEM161BQ8NDZ6 487 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 GSTCDQ8NEC7 633 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 TMEM169Q96HH4 297 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 IGSF21Q96ID5 467 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 CDCA3Q99618 268 aaPredicted RBP15□□□□□ -0.01
CSNK1D-208ENST00000578501 ACO2Q99798 780 aaKnown RBP15□□□□□ -0.01
CSNK1D-208ENST00000578501 MRPL4Q9BYD3 311 aaKnown RBP15□□□□□ -0.01
CSNK1D-208ENST00000578501 PTPRHQ9HD43 1115 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 CLDND1Q9NY35 253 aa15□□□□□ -0.01
CSNK1D-208ENST00000578501 NPHP3-ACAD11A0A0J9YXS1 232 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 SLC16A4O15374 487 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 MAPTP10636 758 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 LIG1P18858 919 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 AKAP5P24588 427 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 SLC11A1P49279 550 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 PKP1Q13835 747 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 GIT2Q14161 759 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 BMS1Q14692 1282 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 RRAGBQ5VZM2 374 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 EEF1DP3Q658K8 133 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 CCDC73Q6ZRK6 1079 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 COLGALT2Q8IYK4 626 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 MICAL1Q8TDZ2 1067 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 EDAQ92838 391 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 ZFP42Q96MM3 310 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 TCF25Q9BQ70 676 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 REEP2Q9BRK0 252 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 APOL6Q9BWW8 343 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 IRF2BPLQ9H1B7 796 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 MIOSQ9NXC5 875 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 TFIP11Q9UBB9 837 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 DNAJB4Q9UDY4 337 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 USP20Q9Y2K6 914 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 ATG2AQ2TAZ0 1938 aa14.99□□□□□ -0.01
CSNK1D-208ENST00000578501 NT5C1B-RDH14C9J2C7 533 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 B4GALT3O60512 393 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 BRD1O95696 1058 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 PROZP22891 400 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 ABCD1P33897 745 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 LTBRP36941 435 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 SCNN1GP51170 649 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 NCKAP1LP55160 1127 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 GRIK3Q13003 919 aa14.98□□□□□ -0.01
CSNK1D-208ENST00000578501 STRN3Q13033 797 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms