RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 ZNF623O75123 536 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 RFPL1O75677 317 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 RPLP2P05387 115 aaKnown RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 HMGB1P09429 215 aaKnown RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 HSP90B1P14625 803 aaKnown RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 ZSCAN20P17040 1043 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 COMTP21964 271 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 AKAP5P24588 427 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 PTPN7P35236 360 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 SREBF1P36956 1147 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 APBA1Q02410 837 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 MRPL49Q13405 166 aaKnown RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 SEPT2Q15019 361 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 UAP1L1Q3KQV9 507 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 FKBP15Q5T1M5 1219 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 PPP4R3AQ6IN85 833 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 D2HGDHQ8N465 521 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 LILRA3Q8N6C8 439 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 CHST13Q8NET6 341 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 MDM1Q8TC05 714 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 DPF2Q92785 391 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 FAM89AQ96GI7 184 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 LOXL4Q96JB6 756 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 ZNF512Q96ME7 567 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 UHRF1Q96T88 793 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 RHOBTB2Q9BYZ6 727 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 CDH19Q9H159 772 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 EPC1Q9H2F5 836 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 LANCL2Q9NS86 450 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 ZIM2Q9NZV7 527 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 PNMA8BQ9ULN7 279 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 IPPQ9Y573 584 aa2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 ADAMTS20P59510 1910 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CCDC154A6NI56 674 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 B5MCH6 92 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CYP27B1O15528 508 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 ADCY6O43306 1168 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SGTAO43765 313 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 IPO13O94829 963 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 U2AF1L5P0DN76 240 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 PF4V1P10720 104 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 IL2RBP14784 551 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 GNAT2P19087 354 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CYP2C19P33261 490 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 GUCY1A2P33402 732 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SLC6A9P48067 706 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 FLT3LGP49771 235 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SELENOPP49908 381 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 U2AF1Q01081 240 aaKnown RBP eCLIP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SP140Q13342 867 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 ICAM4Q14773 271 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 PPP2R5AQ15172 486 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 ELAVL1Q15717 326 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 NFE2Q16621 373 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 FAM214AQ32MH5 1076 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 FAM47AQ5JRC9 791 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 RRP12Q5JTH9 1297 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 PRAMEF14Q5SWL7 426 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 MAMDC4Q6UXC1 1216 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 Q6ZSN1 163 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 DOK3Q7L591 496 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 ZNF572Q7Z3I7 529 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 APBB1IPQ7Z5R6 666 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 FAM83AQ86UY5 434 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 RHOT1Q8IXI2 618 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 RAVER1Q8IY67 606 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 TRMT2AQ8IZ69 625 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 ANKRD35Q8N283 1001 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 OR2I1PQ8NGU4 316 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 Q8TCH9 128 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CASKIN2Q8WXE0 1202 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 JPH3Q8WXH2 748 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 EDAQ92838 391 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 MIEF2Q96C03 454 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 PDCD2LQ9BRP1 358 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 RTFDC1Q9BY42 306 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SENP6Q9GZR1 1112 aaPredicted RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 DEF6Q9H4E7 631 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CD248Q9HCU0 757 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 TMEM140Q9NV12 185 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SMPD4Q9NXE4 827 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 MOCS1Q9NZB8 636 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 KLHL42Q9P2K6 505 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SERPINB13Q9UIV8 391 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 G3BP2Q9UN86 482 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 LIMCH1Q9UPQ0 1083 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CLCA2Q9UQC9 943 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 HDAC5Q9UQL6 1122 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SIK3Q9Y2K2 1263 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 SH3BP1Q9Y3L3 701 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 TCAF1Q9Y4C2 921 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 CFAP20Q9Y6A4 193 aaKnown RBP2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 NISCHQ9Y2I1 1504 aa2.91□□□□□ -1.94
PTP4A1-204ENST00000578299 ZMYM3Q14202 1370 aa2.9□□□□□ -1.94
PTP4A1-204ENST00000578299 BTBD11A6QL63 1104 aa2.9□□□□□ -1.95
PTP4A1-204ENST00000578299 CAPN14A8MX76 684 aa2.9□□□□□ -1.95
PTP4A1-204ENST00000578299 PRR5-ARHGAP8B1AHC4 643 aa2.9□□□□□ -1.95
PTP4A1-204ENST00000578299 PJA2O43164 708 aa2.9□□□□□ -1.95
PTP4A1-204ENST00000578299 TEX33O43247 280 aa2.9□□□□□ -1.95
PTP4A1-204ENST00000578299 MFAP3LO75121 409 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms