RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 ZNF558Q96NG5 402 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 TCHPQ9BT92 498 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 LRRC27Q9C0I9 530 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 GBP3Q9H0R5 595 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 TNMDQ9H2S6 317 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 SERTAD1Q9UHV2 236 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 TBX20Q9UMR3 447 aa17.23■□□□□ 0.35
NCBP3-207ENST00000577169 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
NCBP3-207ENST00000577169 NT5C1B-RDH14C9J2C7 533 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 K7ENM7 598 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 FGF18O76093 207 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 GAP43P17677 238 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 DNAJB1P25685 340 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 MLH1P40692 756 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 BCAR1P56945 870 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 GTF2BQ00403 316 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 AMPD3Q01432 767 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 DCAF4L1Q3SXM0 396 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 ZC2HC1CQ53FD0 456 aaPredicted RBP17.22■□□□□ 0.35
NCBP3-207ENST00000577169 ZNF720Q7Z2F6 126 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 KCNN1Q92952 543 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 ZFP42Q96MM3 310 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
NCBP3-207ENST00000577169 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 CDT1Q9H211 546 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 PANK4Q9NVE7 773 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 TBC1D7Q9P0N9 293 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
NCBP3-207ENST00000577169 ABLIM1O14639 778 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 INPPL1O15357 1258 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 B4GALT3O60512 393 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.35
NCBP3-207ENST00000577169 GALTP07902 379 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 PFKFB1P16118 471 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 PROZP22891 400 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 ALDH7A1P49419 539 aaKnown RBP17.21■□□□□ 0.35
NCBP3-207ENST00000577169 SCNN1GP51170 649 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 CAMK1Q14012 370 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 ZNF568Q3ZCX4 644 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 HERC4Q5GLZ8 1057 aaPredicted RBP17.21■□□□□ 0.35
NCBP3-207ENST00000577169 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 APBB1IPQ7Z5R6 666 aaPredicted RBP17.21■□□□□ 0.35
NCBP3-207ENST00000577169 GSTCDQ8NEC7 633 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 POF1BQ8WVV4 589 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 C7orf25Q9BPX7 421 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
NCBP3-207ENST00000577169 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
NCBP3-207ENST00000577169 CIZ1Q9ULV3 898 aaPredicted RBP17.21■□□□□ 0.35
NCBP3-207ENST00000577169 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
NCBP3-207ENST00000577169 TOM1L1O75674 476 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 RECQL4O94761 1208 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 CSPG5O95196 566 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 ALDH2P05091 517 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 SCP2P22307 547 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 AFMP43652 599 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 PLCB3Q01970 1234 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 SLC39A11Q8N1S5 342 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 CEP120Q8N960 986 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 SLC17A8Q8NDX2 589 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 BICD1Q96G01 975 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 TRIM9Q9C026 710 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 CXCL16Q9H2A7 254 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 ST6GALNAC4Q9H4F1 302 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 MRPL44Q9H9J2 332 aaKnown RBP17.2■□□□□ 0.34
NCBP3-207ENST00000577169 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 PLXNA4Q9HCM2 1894 aa17.2■□□□□ 0.34
NCBP3-207ENST00000577169 CHD9Q3L8U1 2897 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
NCBP3-207ENST00000577169 A0A1W2PQ27 194 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 A0A1W2PQ64 194 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 A0A1W2PQD8 194 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 FRMD3A2A2Y4 597 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 SLFN14P0C7P3 912 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 MCF2P10911 925 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 HARSP12081 509 aaKnown RBP17.19■□□□□ 0.34
NCBP3-207ENST00000577169 CASP1P29466 404 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 GRM5P41594 1212 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 MATR3P43243 847 aaKnown RBP eCLIP17.19■□□□□ 0.34
NCBP3-207ENST00000577169 SLC11A1P49279 550 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 OSTNP61366 133 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 KRT17Q04695 432 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 COLGALT2Q8IYK4 626 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 FSIP1Q8NA03 581 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
NCBP3-207ENST00000577169 RPS6KC1Q96S38 1066 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 CCDC94Q9BW85 323 aaPredicted RBP17.19■□□□□ 0.34
NCBP3-207ENST00000577169 STRA6Q9BX79 667 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 HAPLN2Q9GZV7 340 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 BLZF1Q9H2G9 400 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 MAGEF1Q9HAY2 307 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 PUF60Q9UHX1 559 aaKnown RBP17.19■□□□□ 0.34
NCBP3-207ENST00000577169 FAN1Q9Y2M0 1017 aa17.19■□□□□ 0.34
NCBP3-207ENST00000577169 TDRD15B5MCY1 1934 aaKnown RBP17.18■□□□□ 0.34
NCBP3-207ENST00000577169 FAM237AA0A1B0GTK4 181 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms