RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GMNCA6NCL1 334 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 DCDC2CA8MYV0 355 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 E7EVH7 732 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 ATP9AO75110 1047 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CCNE2O96020 404 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 MMEP08473 750 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PYGMP11217 842 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 EIF2AK2P19525 551 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 GBP1P32455 592 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 LIG3P49916 1009 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 GPC3P51654 580 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PMS2P54278 862 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 MAGOHP61326 146 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SNRNP35Q16560 246 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CYP1B1Q16678 543 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 KRT39Q6A163 491 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 MAP4K3Q8IVH8 894 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CPXCR1Q8N123 301 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TMEM161BQ8NDZ6 487 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 AGBL3Q8NEM8 1001 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 MAGOHBQ96A72 148 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TMEM8AQ9HCN3 771 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PPANQ9NQ55 473 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TRPC6Q9Y210 931 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 WDR64B1ANS9 1081 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PODXLO00592 558 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TMOD1P28289 359 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SFNP31947 248 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 RPS6P62753 249 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CDR2Q01850 454 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 XKR9Q5GH70 373 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SEL1L2Q5TEA6 688 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PLA2G4FQ68DD2 849 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TTLL6Q8N841 843 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PARD3BQ8TEW8 1205 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 MFSD14AQ96MC6 490 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 KIAA1683Q9H0B3 1180 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PABPC3Q9H361 631 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CHORDC1Q9UHD1 332 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SHBGP04278 402 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CYP11B1P15538 503 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 RPL21P46778 160 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 NPTX2P47972 431 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PLTPP55058 493 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 KRT76Q01546 638 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 IFFO1Q0D2I5 559 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SIX1Q15475 284 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 ODF2Q5BJF6 829 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 C6orf89Q6UWU4 347 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SLC13A5Q86YT5 568 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 ZNF564Q8TBZ8 553 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 FBXO25Q8TCJ0 367 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TMC2Q8TDI7 906 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 DDX1Q92499 740 aaKnown RBP9.62□□□□□ -0.87
NCBP3-204ENST00000574911 RAPGEF5Q92565 580 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 SAAL1Q96ER3 474 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 PDCD2LQ9BRP1 358 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 NUP85Q9BW27 656 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.872e-25■■■■■ 316.7
NCBP3-204ENST00000574911 GTF3C4Q9UKN8 822 aa9.62□□□□□ -0.87
NCBP3-204ENST00000574911 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 RGPD3A6NKT7 1758 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 RGPD4Q7Z3J3 1758 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 C5orf60A6NFR6 353 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 WNT10BO00744 389 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 ATMINO43313 823 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 GRIN3BO60391 1043 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CAND2O75155 1236 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 KIAA0754O94854 1291 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 MYCLP12524 364 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CNGA1P29973 690 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 GTF2H1P32780 548 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 FNTAP49354 379 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 SMTNP53814 917 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 DGKZQ13574 1117 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 SLC39A4Q6P5W5 647 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CCDC137Q6PK04 289 aaKnown RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 ANO5Q75V66 913 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 HOOK3Q86VS8 718 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CPNE8Q86YQ8 564 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 OTUD6BQ8N6M0 293 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 KAT2BQ92831 832 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CCDC127Q96BQ5 260 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 BTBD6Q96KE9 485 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 RUNDC3BQ96NL0 473 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 NTPCRQ9BSD7 190 aaKnown RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 VPS33BQ9H267 617 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms