RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ANKRD62A6NC57 917 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 CNMDO75829 334 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 FTLP02792 175 aaPredicted RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 EDN1P05305 212 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 PGK2P07205 417 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 LMBR1Q8WVP7 490 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 ZNF516Q92618 1163 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 CEP89Q96ST8 783 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 ZMYND15Q9H091 742 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 TXNRD2Q9NNW7 524 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 SUCLA2Q9P2R7 463 aaPredicted RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 TMEM59LQ9UK28 342 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 COQ4Q9Y3A0 265 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 A0A0G2JLL6 359 aaPredicted RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 LIG4P49917 911 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 GUCY2DQ02846 1103 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 GPS2Q13227 327 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 PRPF4BQ13523 1007 aaKnown RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 PRRT2Q7Z6L0 340 aaPredicted RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 FMNL3Q8IVF7 1028 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 FBXL13Q8NEE6 735 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 TMC2Q8TDI7 906 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 HES6Q96HZ4 224 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 PBKQ96KB5 322 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 DHX33Q9H6R0 707 aaKnown RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 EPB41L5Q9HCM4 733 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 RAB20Q9NX57 234 aa25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 NOC2LQ9Y3T9 749 aaKnown RBP25.54■■□□□ 1.68
NPLOC4-217ENST00000574897 LRRIQ4A6NIV6 560 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 ATMINO43313 823 aaPredicted RBP25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 RAD51CO43502 376 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 MMEP08473 750 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 EDNRBP24530 442 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 CARSP49589 748 aaKnown RBP25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 LY6KQ17RY6 165 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 SHC3Q92529 594 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 FBXO40Q9UH90 709 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 CES2O00748 559 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 GARTP22102 1010 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 ACOT2P49753 483 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 GPC3P51654 580 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 NLRP11P59045 1033 aaKnown RBP25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 DRP2Q13474 957 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 SYCE1Q8N0S2 351 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 PORCNQ9H237 461 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 VIPAS39Q9H9C1 493 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 AMFRQ9UKV5 643 aa25.53■■□□□ 1.68
NPLOC4-217ENST00000574897 IGKV6D-21A0A0A0MT36 114 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 SYF2O95926 243 aaKnown RBP25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 IREB2P48200 963 aaKnown RBP25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 FAM193AP78312 1265 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 ARIH2O95376 493 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 ITGA4P13612 1032 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 MFAP3P55082 362 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 GLE1Q53GS7 698 aaKnown RBP25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 ZBTB41Q5SVQ8 909 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 DCAF12L1Q5VU92 463 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 ACTRT1Q8TDG2 376 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 SCFD2Q8WU76 684 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 NT5C1BQ96P26 610 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 ISCUQ9H1K1 167 aa25.52■■□□□ 1.68
NPLOC4-217ENST00000574897 PTPRJQ12913 1337 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 GGPS1O95749 300 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 TTLL12Q14166 644 aaPredicted RBP25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 Q3C1V9 767 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 IFT81Q8WYA0 676 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 ADAM21Q9UKJ8 722 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 ZHX1Q9UKY1 873 aaPredicted RBP25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 NFU1Q9UMS0 254 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 PGRMC1O00264 195 aaKnown RBP25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 DDX3YO15523 660 aaKnown RBP25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 FMO1Q01740 532 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 TSEN2Q8NCE0 465 aaKnown RBP25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 CDCA5Q96FF9 252 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 GDF3Q9NR23 364 aa25.51■■□□□ 1.67
NPLOC4-217ENST00000574897 ZNF233A6NK53 670 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 AGPSO00116 658 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 FAM153BP0C7A2 387 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 TCF7P36402 384 aaPredicted RBP25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 ARL2P36404 184 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 FAM153CQ494X1 144 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 CASKIN2Q8WXE0 1202 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 RUBCNQ92622 972 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 FGD4Q96M96 766 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.5■■□□□ 1.679e-7■■□□□ 13.4
NPLOC4-217ENST00000574897 TARS2Q9BW92 718 aaKnown RBP25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 MAF1Q9H063 256 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 DDX47Q9H0S4 455 aaKnown RBP25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 FAM153AQ9UHL3 310 aa25.5■■□□□ 1.67
NPLOC4-217ENST00000574897 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.671e-7■□□□□ 9.7
NPLOC4-217ENST00000574897 GGCXP38435 758 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 SEZ6Q53EL9 994 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 TRIM50Q86XT4 487 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 ERO1BQ86YB8 467 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 DEPTORQ8TB45 409 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 SLC7A3Q8WY07 619 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 CTTNBP2NLQ9P2B4 639 aa25.49■■□□□ 1.67
NPLOC4-217ENST00000574897 TTLL13PA6NNM8 815 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms