RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SCNN1GP51170 649 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 GPC5P78333 572 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 FUT10Q6P4F1 479 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 RSPO2Q6UXX9 243 aaPredicted RBP13.32□□□□□ -0.28
CTNS-208ENST00000574218 GPR65Q8IYL9 337 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 ST13P5Q8NFI4 369 aaPredicted RBP13.32□□□□□ -0.28
CTNS-208ENST00000574218 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 PRPF31Q8WWY3 499 aaKnown RBP13.32□□□□□ -0.28
CTNS-208ENST00000574218 GJA10Q969M2 543 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 OSBPL6Q9BZF3 934 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 ZSCAN32Q9NX65 697 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 CDH7Q9ULB5 785 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 POLIQ9UNA4 740 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 IPPQ9Y573 584 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 FAM170BA6NMN3 283 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 XYLBO75191 536 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 TADA2AO75478 443 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 STBD1O95210 358 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
CTNS-208ENST00000574218 ATXN1P54253 815 aaKnown RBP13.31□□□□□ -0.28
CTNS-208ENST00000574218 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 PCBP1Q15365 356 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTNS-208ENST00000574218 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 PPM1LQ5SGD2 360 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 ZBTB41Q5SVQ8 909 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 UBXN11Q5T124 520 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 ANO5Q75V66 913 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 GRASPQ7Z6J2 395 aaPredicted RBP13.31□□□□□ -0.28
CTNS-208ENST00000574218 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
CTNS-208ENST00000574218 RNF149Q8NC42 400 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 FGF14Q92915 247 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 B3GALT6Q96L58 329 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 RTKNQ9BST9 563 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 RNF26Q9BY78 433 aaPredicted RBP13.31□□□□□ -0.28
CTNS-208ENST00000574218 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
CTNS-208ENST00000574218 ADAM28Q9UKQ2 775 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 GIT1Q9Y2X7 761 aa13.31□□□□□ -0.28
CTNS-208ENST00000574218 MAP1BP46821 2468 aaKnown RBP13.3□□□□□ -0.28
CTNS-208ENST00000574218 MARCH6O60337 910 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 TBC1D4O60343 1298 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 PAPLNO95428 1278 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 TDP2O95551 362 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 HNRNPA1P09651 372 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTNS-208ENST00000574218 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
CTNS-208ENST00000574218 NPEPPSP55786 919 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 DSC1Q08554 894 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 TFDP1Q14186 410 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 PARM1Q6UWI2 310 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 Q6ZUG5 572 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 MAML2Q8IZL2 1156 aaPredicted RBP13.3□□□□□ -0.28
CTNS-208ENST00000574218 SMG8Q8ND04 991 aaKnown RBP13.3□□□□□ -0.28
CTNS-208ENST00000574218 CHAMP1Q96JM3 812 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 NELL2Q99435 816 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 SH3GLB2Q9NR46 395 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 MRPS17Q9Y2R5 130 aaKnown RBP13.3□□□□□ -0.28
CTNS-208ENST00000574218 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.284e-12■■■■■ 275.7
CTNS-208ENST00000574218 GPR179Q6PRD1 2367 aa13.3□□□□□ -0.28
CTNS-208ENST00000574218 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 C8AP07357 584 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 GRIK3Q13003 919 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 PPP2R5DQ14738 602 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 BRF1Q92994 677 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 CPB2Q96IY4 423 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 ZFP42Q96MM3 310 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 MTRQ99707 1265 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 RPP25Q9BUL9 199 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 EIF2AQ9BY44 585 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 GPR62Q9BZJ7 368 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 CSRNP2Q9H175 543 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 EPC1Q9H2F5 836 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 DHX33Q9H6R0 707 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 DDX25Q9UHL0 483 aaKnown RBP13.29□□□□□ -0.28
CTNS-208ENST00000574218 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
CTNS-208ENST00000574218 CYP3A7-CYP3A51PA0A087WV96 503 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 F8W810 466 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 CCL16O15467 120 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 TSPAN1O60635 241 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 EFEMP2O95967 443 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 CYP3A7P24462 503 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
CTNS-208ENST00000574218 EMC2Q15006 297 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 PSMD5Q16401 504 aa13.28□□□□□ -0.28
CTNS-208ENST00000574218 TSGA10IPQ3SY00 556 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms