RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	KIFC3	Q9BVG8	833 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	RUSC1	Q9BVN2	902 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	CCDC113	Q9H0I3	377 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	ZBP1	Q9H171	429 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	PDZD7	Q9H5P4	517 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	KMT5A	Q9NQR1	393 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	FOXD4L1	Q9NU39	408 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	KCND2	Q9NZV8	630 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	CLEC1B	Q9P126	229 aa		13.16	□□□□□ -0.3
ABR-222	ENST00000573667	CUL9	Q8IWT3	2517 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	INPPL1	O15357	1258 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	HSP90AA1	P07900	732 aa	Known RBP	13.15	□□□□□ -0.3
ABR-222	ENST00000573667	GUCY2C	P25092	1073 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	NPTX2	P47972	431 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	GRIK3	Q13003	919 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	DCAF4L1	Q3SXM0	396 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	ATF7IP2	Q5U623	682 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	C1orf186	Q6ZWK4	172 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	HSCB	Q8IWL3	235 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	COLGALT2	Q8IYK4	626 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	SMRP1	Q8NCR6	262 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	CASP10	Q92851	521 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	COLEC11	Q9BWP8	271 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	TMEM134	Q9H6X4	195 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	KLK14	Q9P0G3	267 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	SSX2IP	Q9Y2D8	614 aa		13.15	□□□□□ -0.3
ABR-222	ENST00000573667	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-222	ENST00000573667	RBM19	Q9Y4C8	960 aa	Known RBP	13.15	□□□□□ -0.3
ABR-222	ENST00000573667	TTLL13P	A6NNM8	815 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	B4GALT3	O60512	393 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	PLA2G4B	P0C869	781 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	SMTN	P53814	917 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	RBM10	P98175	930 aa	Known RBP	13.14	□□□□□ -0.31
ABR-222	ENST00000573667	RAD51AP2	Q09MP3	1159 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	STRN3	Q13033	797 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	TMEM119	Q4V9L6	283 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	ANKRD54	Q6NXT1	300 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	TMEM184A	Q6ZMB5	413 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	ADHFE1	Q8IWW8	467 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.14	□□□□□ -0.31
ABR-222	ENST00000573667	EMILIN2	Q9BXX0	1053 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	MRPL4	Q9BYD3	311 aa	Known RBP	13.14	□□□□□ -0.31
ABR-222	ENST00000573667	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.14	□□□□□ -0.31
ABR-222	ENST00000573667	MRPL17	Q9NRX2	175 aa	Known RBP	13.14	□□□□□ -0.31
ABR-222	ENST00000573667	MIOS	Q9NXC5	875 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	SNTG2	Q9NY99	539 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	HCFC2	Q9Y5Z7	792 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	IRAK3	Q9Y616	596 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	C2orf16	Q68DN1	1984 aa		13.14	□□□□□ -0.31
ABR-222	ENST00000573667	SPDYE4	A6NLX3	237 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	SFI1	A8K8P3	1242 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	STX6	O43752	255 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	CLASP2	O75122	1294 aa	Known RBP	13.13	□□□□□ -0.31
ABR-222	ENST00000573667	RECQL4	O94761	1208 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	SOD2	P04179	222 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	UROD	P06132	367 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	TH	P07101	528 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	HOXB8	P17481	243 aa	Predicted RBP	13.13	□□□□□ -0.31
ABR-222	ENST00000573667	TXLNA	P40222	546 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	SLC12A3	P55017	1021 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	ZP2	Q05996	745 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	DSC1	Q08554	894 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	REST	Q13127	1097 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	KCNC3	Q14003	757 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	DHX8	Q14562	1220 aa	Known RBP	13.13	□□□□□ -0.31
ABR-222	ENST00000573667	TPRN	Q4KMQ1	711 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	PPFIBP1	Q86W92	1011 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	DAW1	Q8N136	415 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	VN1R2	Q8NFZ6	395 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	AUTS2	Q8WXX7	1259 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	SNX21	Q969T3	373 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	TCHP	Q9BT92	498 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	C1QTNF1	Q9BXJ1	281 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	LARS	Q9P2J5	1176 aa	Known RBP	13.13	□□□□□ -0.31
ABR-222	ENST00000573667	ARHGAP28	Q9P2N2	729 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	TNFSF13B	Q9Y275	285 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	USP20	Q9Y2K6	914 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	GDA	Q9Y2T3	454 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	CLIC4	Q9Y696	253 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	NCOR1	O75376	2440 aa		13.13	□□□□□ -0.31
ABR-222	ENST00000573667	MUC3A	Q02505	3323 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	VWA8	A3KMH1	1905 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667		H0YCG3	227 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	C2CD2L	O14523	706 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	SLC16A4	O15374	487 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	EDN1	P05305	212 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	KRT18	P05783	430 aa	Known RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	PLS3	P13797	630 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	YARS	P54577	528 aa	Known RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	CEBPZ	Q03701	1054 aa	Known RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	MAPK7	Q13164	816 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	TUSC3	Q13454	348 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	KARS	Q15046	597 aa	Known RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	PTPN14	Q15678	1187 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	ZNF568	Q3ZCX4	644 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	NT5DC1	Q5TFE4	455 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	EEF1DP3	Q658K8	133 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	KIAA1841	Q6NSI8	718 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	CES5A	Q6NT32	575 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	GSTCD	Q8NEC7	633 aa		13.12	□□□□□ -0.31

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