RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 MSRAQ9UJ68 235 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 HLA-DOAP06340 250 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 SPATA31D3P0C874 917 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 RBP3P10745 1247 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 EGR2P11161 476 aaPredicted RBP6.65□□□□□ -1.34
CHD9-220ENST00000569794 XPAP23025 273 aaPredicted RBP6.65□□□□□ -1.34
CHD9-220ENST00000569794 PLA2G5P39877 138 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 ELLP55199 621 aaPredicted RBP6.65□□□□□ -1.34
CHD9-220ENST00000569794 APBA1Q02410 837 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 MGAT5Q09328 741 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 SQSTM1Q13501 440 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 UBE3CQ15386 1083 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 LMBR1LQ6UX01 489 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 SPATA31D4Q6ZUB0 917 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 BOLLQ8N9W6 283 aaKnown RBP6.65□□□□□ -1.34
CHD9-220ENST00000569794 LRFN3Q9BTN0 628 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 IFT57Q9NWB7 429 aa6.65□□□□□ -1.34
CHD9-220ENST00000569794 B5MCH6 92 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 SPDEFO95238 335 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 ESRRBO95718 433 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 F2P00734 622 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 NCLP19338 710 aaKnown RBP6.64□□□□□ -1.35
CHD9-220ENST00000569794 MGAT1P26572 445 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 NRG3P56975 720 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 DHX37Q8IY37 1157 aaKnown RBP6.64□□□□□ -1.35
CHD9-220ENST00000569794 MAP3K2Q9Y2U5 619 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 ZMYM3Q14202 1370 aa6.64□□□□□ -1.35
CHD9-220ENST00000569794 PPP1R12AO14974 1030 aaPredicted RBP6.63□□□□□ -1.35
CHD9-220ENST00000569794 TGM5O43548 720 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 GAS7O60861 476 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 CLEC2LP0C7M8 214 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 MPLP40238 635 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 DDB1Q16531 1140 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 FAM102AQ5T9C2 384 aaPredicted RBP6.63□□□□□ -1.35
CHD9-220ENST00000569794 METRNLQ641Q3 311 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 EFCAB12Q6NXP0 572 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 KIF18BQ86Y91 864 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 PASD1Q8IV76 773 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 PMFBP1Q8TBY8 1022 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 CHTF18Q8WVB6 975 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 SLC9A6Q92581 669 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 CDC5LQ99459 802 aaKnown RBP6.63□□□□□ -1.35
CHD9-220ENST00000569794 POGKQ9P215 609 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 FPGT-TNNI3KV9GXZ4 949 aa6.63□□□□□ -1.35
CHD9-220ENST00000569794 PRSS38A1L453 326 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 TBKBP1A7MCY6 615 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
CHD9-220ENST00000569794 RFPL3O75679 317 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 C1RP00736 705 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 LTA4HP09960 611 aaKnown RBP6.62□□□□□ -1.35
CHD9-220ENST00000569794 DSG1Q02413 1049 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 RESTQ13127 1097 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 MPP3Q13368 585 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 BMT2Q1RMZ1 405 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 GPR158Q5T848 1215 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 NXPE1Q8N323 547 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 RNF169Q8NCN4 708 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 SPATA5L1Q9BVQ7 753 aa6.62□□□□□ -1.35
CHD9-220ENST00000569794 MAGEC2Q9UBF1 373 aaPredicted RBP6.62□□□□□ -1.35
CHD9-220ENST00000569794 USP15Q9Y4E8 981 aaPredicted RBP6.62□□□□□ -1.35
CHD9-220ENST00000569794 COL11A2P13942 1736 aaPredicted RBP6.62□□□□□ -1.35
CHD9-220ENST00000569794 MAST3O60307 1309 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 ZNF891A8MT65 544 aaPredicted RBP6.61□□□□□ -1.35
CHD9-220ENST00000569794 ERBB2P04626 1255 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 PPARAQ07869 468 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 PABPC4Q13310 644 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD9-220ENST00000569794 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
CHD9-220ENST00000569794 ANKRD13AQ8IZ07 590 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 TFAP2CQ92754 450 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 NEU1Q99519 415 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 THG1LQ9NWX6 298 aaKnown RBP6.61□□□□□ -1.35
CHD9-220ENST00000569794 TLK1Q9UKI8 766 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 TMPRSS11EQ9UL52 423 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 FRMD4BQ9Y2L6 1034 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 NUMBLQ9Y6R0 609 aa6.61□□□□□ -1.35
CHD9-220ENST00000569794 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
CHD9-220ENST00000569794 LCHNA4D1U4 455 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 PRAMEF4O60810 478 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 ITGAMP11215 1152 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 SCAPQ12770 1279 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 C19orf54Q5BKX5 351 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 ZNF362Q5T0B9 420 aaPredicted RBP6.6□□□□□ -1.35
CHD9-220ENST00000569794 ARMC6Q6NXE6 501 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 LYSMD2Q8IV50 215 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 SLC44A3Q8N4M1 653 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 CAGE1Q8TC20 777 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 RNF181Q9P0P0 153 aa6.6□□□□□ -1.35
CHD9-220ENST00000569794 TESQ9UGI8 421 aaKnown RBP6.6□□□□□ -1.35
CHD9-220ENST00000569794 EVLQ9UI08 416 aaPredicted RBP6.6□□□□□ -1.35
CHD9-220ENST00000569794 SALL3Q9BXA9 1300 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 KPNA6O60684 536 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 ITGA10O75578 1167 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 CFIP05156 583 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 PHC1P78364 1004 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 SLC41A1Q8IVJ1 513 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 UBXN4Q92575 508 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 CEP95Q96GE4 821 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms