RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 TMEM39BQ9GZU3 492 aa9.24□□□□□ -0.93
CDH11-216ENST00000569128 CDH19Q9H159 772 aa9.24□□□□□ -0.93
CDH11-216ENST00000569128 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
CDH11-216ENST00000569128 ADARB2Q9NS39 739 aaKnown RBP9.24□□□□□ -0.93
CDH11-216ENST00000569128 SFMBT1Q9UHJ3 866 aa9.24□□□□□ -0.93
CDH11-216ENST00000569128 CTNNA3Q9UI47 895 aa9.24□□□□□ -0.93
CDH11-216ENST00000569128 NAV1Q8NEY1 1877 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 GPR39O43194 453 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 BRINP1O60477 761 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 PRDM1O75626 825 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 C6orf222P0C671 652 aaPredicted RBP9.23□□□□□ -0.93
CDH11-216ENST00000569128 MMP14P50281 582 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 STRN3Q13033 797 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 C14orf80Q86SX3 495 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 VSIG10LQ86VR7 867 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 PPIL6Q8IXY8 311 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 FLCNQ8NFG4 579 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 FAM151AQ8WW52 585 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 MTMR8Q96EF0 704 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 TCEANC2Q96MN5 208 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 JAKMIP1Q96N16 626 aaKnown RBP9.23□□□□□ -0.93
CDH11-216ENST00000569128 PTCHD1Q96NR3 888 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 UPF3BQ9BZI7 483 aaKnown RBP9.23□□□□□ -0.93
CDH11-216ENST00000569128 ZNF700Q9H0M5 742 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 NMRK2Q9NPI5 230 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 GGA3Q9NZ52 723 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 TMOD2Q9NZR1 351 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 LMCD1Q9NZU5 365 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 PGAP2Q9UHJ9 254 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 TMEFF2Q9UIK5 374 aaPredicted RBP9.23□□□□□ -0.93
CDH11-216ENST00000569128 ANAPC4Q9UJX5 808 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 FOCADQ5VW36 1801 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 ZMYM6O95789 1325 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 NEDD4P46934 1319 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 MYH1P12882 1939 aa9.23□□□□□ -0.93
CDH11-216ENST00000569128 KIAA1324LA8MWY0 1029 aaPredicted RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 MEFVO15553 781 aaPredicted RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 MYO1BO43795 1136 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 ENTPD3O75355 529 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 DNAJC8O75937 253 aaPredicted RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 ENDOUP21128 410 aaKnown RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 ITKQ08881 620 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 RRP12Q5JTH9 1297 aaKnown RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 AKNAD1Q5T1N1 836 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 CYB5R4Q7L1T6 521 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 TTC8Q8TAM2 541 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 MPHOSPH6Q99547 160 aaKnown RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 LRRC2Q9BYS8 371 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 PRDM7Q9NQW5 492 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 ERVK13-1Q9NX77 482 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 SLAMF8Q9P0V8 285 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 ARPP21Q9UBL0 812 aaPredicted RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDH11-216ENST00000569128 ZNF281Q9Y2X9 895 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 DDX60LQ5H9U9 1706 aaKnown RBP9.22□□□□□ -0.93
CDH11-216ENST00000569128 WDR90Q96KV7 1748 aa9.22□□□□□ -0.93
CDH11-216ENST00000569128 POLR2AP24928 1970 aaKnown RBP9.21□□□□□ -0.93
CDH11-216ENST00000569128 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 B4E1Z4 1266 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 ADM5C9JUS6 153 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 ARNTLO00327 626 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 ADAM23O75077 832 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 ZKSCAN1P17029 563 aaPredicted RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 PAMP19021 973 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 CASTP20810 708 aaKnown RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 ANTXR2P58335 489 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 GABPAQ06546 454 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 RRP1BQ14684 758 aaKnown RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 BRD3Q15059 726 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 SHROOM1Q2M3G4 852 aaPredicted RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 LONRF3Q496Y0 759 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 FAM47AQ5JRC9 791 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 SYCP2LQ5T4T6 812 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 FKBP1CQ5VVH2 108 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 NXNQ6DKJ4 435 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 PPP4R4Q6NUP7 873 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 NFXL1Q6ZNB6 911 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 USP50Q70EL3 339 aaPredicted RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 MIGA2Q7L4E1 593 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 CPNE8Q86YQ8 564 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 PASD1Q8IV76 773 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 CCDC103Q8IW40 242 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 TEPSINQ96N21 525 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 NEK1Q96PY6 1258 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 SMAD5Q99717 465 aaKnown RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 DEFB129Q9H1M3 183 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 DNAJC18Q9H819 358 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 TRIM39Q9HCM9 518 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 TOMM22Q9NS69 142 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 NDOR1Q9UHB4 597 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 ANGEL1Q9UNK9 670 aaKnown RBP9.21□□□□□ -0.94
CDH11-216ENST00000569128 FZD1Q9UP38 647 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 SIPA1L1O43166 1804 aa9.21□□□□□ -0.94
CDH11-216ENST00000569128 LAMA4Q16363 1823 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 LDHAP00338 332 aaKnown RBP9.2□□□□□ -0.94
CDH11-216ENST00000569128 SHMT1P34896 483 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 NEK4P51957 841 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms