RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 CABP7Q86V35 215 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 PPFIBP1Q86W92 1011 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 TMEM105Q8N8V8 129 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 LPPQ93052 612 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 PYM1Q9BRP8 204 aaKnown RBP17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 SFXN1Q9H9B4 322 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 TBC1D13Q9NVG8 400 aa17.14■□□□□ 0.33
SCAMP2-210ENST00000569124 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 PROB1E7EW31 1015 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 EML1O00423 815 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 MCM4P33991 863 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 ZRSR1Q15695 479 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 NOMO2Q5JPE7 1267 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 ASTLQ6HA08 431 aaPredicted RBP17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 CATSPER4Q7RTX7 472 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 FSIP1Q8NA03 581 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 URGCPQ8TCY9 931 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 NLRP4Q96MN2 994 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 EIF2AK1Q9BQI3 630 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 NIFKQ9BYG3 293 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 CCSER1Q9C0I3 900 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 NT5C3AQ9H0P0 336 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 NRDE2Q9H7Z3 1164 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
SCAMP2-210ENST00000569124 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 MUTP22033 750 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 RPA1P27694 616 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 CDC25AP30304 524 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 TMC5Q6UXY8 1006 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 SLC22A17Q8WUG5 538 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 PGBD4Q96DM1 585 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 EPSTI1Q96J88 318 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 POLR3CQ9BUI4 534 aaPredicted RBP17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 EMILIN2Q9BXX0 1053 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
SCAMP2-210ENST00000569124 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 IGKV6-21A0A0C4DH24 114 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 GALTP07902 379 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 NBL1P41271 181 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 QARSP47897 775 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 SLC11A1P49279 550 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 PSMC5P62195 406 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 PTPN14Q15678 1187 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 TPH2Q8IWU9 490 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 DYDC2Q96IM9 177 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 LMBRD1Q9NUN5 540 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 VPS13AQ96RL7 3174 aa17.11■□□□□ 0.33
SCAMP2-210ENST00000569124 GVINP1Q7Z2Y8 2422 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 A0A1B0GVL5 298 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 PRR23AA6NEV1 266 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 ZNF623O75123 536 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 MAFO75444 373 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 OFD1O75665 1012 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 PFKFB1P16118 471 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 CLCN5P51795 746 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 OTOP3Q7RTS5 596 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 ASCL5Q7RTU5 278 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 KCTD17Q8N5Z5 321 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 CCDC34Q96HJ3 373 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 FAM193BQ96PV7 902 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 LXNQ9BS40 222 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 AGPAT5Q9NUQ2 364 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 KCNH3Q9ULD8 1083 aa17.1■□□□□ 0.33
SCAMP2-210ENST00000569124 MED24O75448 989 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 SLITRK3O94933 977 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 STBD1O95210 358 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 KLRC2P26717 231 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 STAT6P42226 847 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 SYKP43405 635 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 CTTNQ14247 550 aaKnown RBP17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 USP49Q70CQ1 688 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 GPR149Q86SP6 731 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms