RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 MRGPRX4Q96LA9 322 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 PPCSQ9HAB8 311 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 KMT5AQ9NQR1 393 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 SPATA6Q9NWH7 488 aaPredicted RBP7.19□□□□□ -1.26
UBR1-208ENST00000569066 TRPS1Q9UHF7 1281 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 FAM171A2A8MVW0 826 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 H3BUI4 141 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 POLD1P28340 1107 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 SREBF1P36956 1147 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 HK3P52790 923 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 MORC3Q14149 939 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 FAM83BQ5T0W9 1011 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 FNIP1Q8TF40 1166 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 EPB41L4AQ9HCS5 686 aaPredicted RBP7.18□□□□□ -1.26
UBR1-208ENST00000569066 RBM8AQ9Y5S9 174 aaKnown RBP7.18□□□□□ -1.26
UBR1-208ENST00000569066 PMF1-BGLAPU3KQ54 211 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 A0A088AWK7 358 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 C2orf78A6NCI8 922 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 LRRC10BA6NIK2 292 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBR1-208ENST00000569066 CREB3O43889 395 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 ZNF28P17035 718 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 CACNB3P54284 484 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 ERAP2Q6P179 960 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 HEATR3Q7Z4Q2 680 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 FAM186BQ8IYM0 893 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 UNC5BQ8IZJ1 945 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 PQLC1Q8N2U9 271 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 IFI44Q8TCB0 444 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 EVI5LQ96CN4 794 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 CDK5RAP3Q96JB5 506 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 UIMC1Q96RL1 719 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 NLRC4Q9NPP4 1024 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 PLCB1Q9NQ66 1216 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 LMBRD1Q9NUN5 540 aa7.18□□□□□ -1.26
UBR1-208ENST00000569066 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
UBR1-208ENST00000569066 ALDH1A2O94788 518 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 FSBPO95073 299 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 PER3P56645 1201 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 DLX2Q07687 328 aaPredicted RBP7.17□□□□□ -1.26
UBR1-208ENST00000569066 SSPNQ14714 243 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 TRIM68Q6AZZ1 485 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 TOGARAM2Q6ZUX3 1019 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 CLEC14AQ86T13 490 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 TTLL6Q8N841 843 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 UHRF1Q96T88 793 aaPredicted RBP7.17□□□□□ -1.26
UBR1-208ENST00000569066 OSBPL6Q9BZF3 934 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 AJAP1Q9UKB5 411 aaPredicted RBP7.17□□□□□ -1.26
UBR1-208ENST00000569066 RUVBL1Q9Y265 456 aaKnown RBP7.17□□□□□ -1.26
UBR1-208ENST00000569066 USP19O94966 1318 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 ITGA10O75578 1167 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 KITP10721 976 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 ETV4P43268 484 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 MRE11P49959 708 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 NKX6-1P78426 367 aaPredicted RBP7.17□□□□□ -1.26
UBR1-208ENST00000569066 MEF2AQ02078 507 aaPredicted RBP7.17□□□□□ -1.26
UBR1-208ENST00000569066 PCOLCEQ15113 449 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 DCBLD1Q8N8Z6 715 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 MYD88Q99836 296 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 CPA4Q9UI42 421 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 FBXO10Q9UK96 956 aa7.17□□□□□ -1.26
UBR1-208ENST00000569066 ENDOD1O94919 500 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 DLG4P78352 724 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 TBR1Q16650 682 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 GRAMD1BQ3KR37 738 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 C1orf228Q6PIY5 440 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 RSPH3Q86UC2 560 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 PPP1R3BQ86XI6 285 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 RTKN2Q8IZC4 609 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 SGCZQ96LD1 299 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 WRNIP1Q96S55 665 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 A0A1B0GTL3 188 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 TOX4O94842 621 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 STK3Q13188 491 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 SYDE1Q6ZW31 735 aaPredicted RBP7.16□□□□□ -1.26
UBR1-208ENST00000569066 C3orf20Q8ND61 904 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 ZNF480Q8WV37 535 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 CCDC138Q96M89 665 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 L2HGDHQ9H9P8 463 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 PCDHA6Q9UN73 950 aa7.16□□□□□ -1.26
UBR1-208ENST00000569066 NCK2O43639 380 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 SGTAO43765 313 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 ZKSCAN1P17029 563 aaPredicted RBP7.15□□□□□ -1.26
UBR1-208ENST00000569066 TLE1Q04724 770 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 SNAPC2Q13487 334 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 PPP4R3AQ6IN85 833 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 LIX1LQ8IVB5 337 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 TRMT2AQ8IZ69 625 aaKnown RBP7.15□□□□□ -1.26
UBR1-208ENST00000569066 PCDHA1Q9Y5I3 950 aa7.15□□□□□ -1.26
UBR1-208ENST00000569066 MALP21145 153 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 GUCY1A2P33402 732 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 IL12RB1P42701 662 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 TAS1R1Q7RTX1 841 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 OR7D4Q8NG98 312 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 IL31RAQ8NI17 732 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 MDM1Q8TC05 714 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 KATNBL1Q9H079 304 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 ACTL7AQ9Y615 435 aa7.15□□□□□ -1.27
UBR1-208ENST00000569066 GPR32O75388 356 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 FOSP01100 380 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms