RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 NPEPPSP55786 919 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 ARHGAP8P85298 464 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 FGD1P98174 961 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 LAMTOR4Q0VGL1 99 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 NTRK3Q16288 839 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 MOXD1Q6UVY6 613 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 MTSS1LQ765P7 747 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 ETNPPLQ8TBG4 499 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 TBCKQ8TEA7 893 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 TCP11Q8WWU5 503 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 FGF14Q92915 247 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 RPP25Q9BUL9 199 aaKnown RBP13.93□□□□□ -0.18
SNX29-207ENST00000568949 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 CDH7Q9ULB5 785 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 GIT1Q9Y2X7 761 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 TDP2O95551 362 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 HNRNPA1P09651 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNX29-207ENST00000568949 MLH1P40692 756 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 SCNN1GP51170 649 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 PFKPQ01813 784 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 LMNB2Q03252 620 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 SNW1Q13573 536 aaKnown RBP13.92□□□□□ -0.18
SNX29-207ENST00000568949 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
SNX29-207ENST00000568949 PARM1Q6UWI2 310 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 ZBTB44Q8NCP5 570 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 CEP170P1Q96L14 293 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 EIF2AQ9BY44 585 aaKnown RBP13.92□□□□□ -0.18
SNX29-207ENST00000568949 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 ZSCAN32Q9NX65 697 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 MIOSQ9NXC5 875 aa13.92□□□□□ -0.18
SNX29-207ENST00000568949 FAM170BA6NMN3 283 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 F8W810 466 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 LILRB5O75023 590 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 IFNAR1P17181 557 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 NLRP5P59047 1200 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 CSTF1Q05048 431 aaKnown RBP13.91□□□□□ -0.18
SNX29-207ENST00000568949 NCBP1Q09161 790 aaKnown RBP13.91□□□□□ -0.18
SNX29-207ENST00000568949 PPP2R5CQ13362 524 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 SLC44A4Q53GD3 710 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 NOTUMQ6P988 496 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 Q6ZUG5 572 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 GRASPQ7Z6J2 395 aaPredicted RBP13.91□□□□□ -0.18
SNX29-207ENST00000568949 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 GLYCTKQ8IVS8 523 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 HACE1Q8IYU2 909 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 RNF149Q8NC42 400 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 ST13P5Q8NFI4 369 aaPredicted RBP13.91□□□□□ -0.18
SNX29-207ENST00000568949 NELL1Q92832 810 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 BRF1Q92994 677 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 B3GALT6Q96L58 329 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 ZFP42Q96MM3 310 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 NELL2Q99435 816 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 SLC26A6Q9BXS9 759 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 EPC1Q9H2F5 836 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 FBXW11Q9UKB1 542 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 ADAM28Q9UKQ2 775 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 PCDHA4Q9UN74 947 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 ZMYM2Q9UBW7 1377 aa13.91□□□□□ -0.18
SNX29-207ENST00000568949 EML1O00423 815 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 TBC1D4O60343 1298 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 TSPAN1O60635 241 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 HOXA9P31269 272 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 UBXN2BQ14CS0 331 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 FGF13Q92913 245 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 CLDN23Q96B33 292 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 RTKNQ9BST9 563 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 LTB4R2Q9NPC1 389 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 CDV3Q9UKY7 258 aaKnown RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 SMG5Q9UPR3 1016 aaKnown RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 MTF2Q9Y483 593 aaPredicted RBP13.9□□□□□ -0.18
SNX29-207ENST00000568949 HES2Q9Y543 173 aa13.9□□□□□ -0.18
SNX29-207ENST00000568949 MAP1BP46821 2468 aaKnown RBP13.89□□□□□ -0.19
SNX29-207ENST00000568949 POU2F2P09086 479 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 RPL17P18621 184 aaKnown RBP13.89□□□□□ -0.19
SNX29-207ENST00000568949 RPS9P46781 194 aaKnown RBP13.89□□□□□ -0.19
SNX29-207ENST00000568949 PTENP60484 403 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 POU5F1BQ06416 359 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 GRIK3Q13003 919 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 MXD4Q14582 209 aaPredicted RBP13.89□□□□□ -0.19
SNX29-207ENST00000568949 EMC2Q15006 297 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 LIN9Q5TKA1 542 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 BLIDQ8IZY5 108 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 FAM20AQ96MK3 541 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 FAM126AQ9BYI3 521 aaPredicted RBP13.89□□□□□ -0.19
SNX29-207ENST00000568949 TRIM6Q9C030 488 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms