RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RNF169Q8NCN4 708 aa18.32■□□□□ 0.52
COMMD4-224ENST00000568877 PGBD4Q96DM1 585 aa18.32■□□□□ 0.52
COMMD4-224ENST00000568877 HAPLN2Q9GZV7 340 aa18.32■□□□□ 0.52
COMMD4-224ENST00000568877 GBP3Q9H0R5 595 aa18.32■□□□□ 0.52
COMMD4-224ENST00000568877 STYXL1Q9Y6J8 313 aa18.32■□□□□ 0.52
COMMD4-224ENST00000568877 ZMYM2Q9UBW7 1377 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 A0A0B4J269 797 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 TGFB1I1O43294 461 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 SKOR2Q2VWA4 1001 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-224ENST00000568877 COBLL1Q53SF7 1204 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 FAM117BQ6P1L5 589 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 HACE1Q8IYU2 909 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 MSTO1Q9BUK6 570 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
COMMD4-224ENST00000568877 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 HES2Q9Y543 173 aa18.31■□□□□ 0.52
COMMD4-224ENST00000568877 GJB5O95377 273 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
COMMD4-224ENST00000568877 ITGA4P13612 1032 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 BMP6P22004 513 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 ADSSP30520 456 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 PRCPP42785 496 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
COMMD4-224ENST00000568877 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
COMMD4-224ENST00000568877 RBM43Q6ZSC3 357 aaKnown RBP18.3■□□□□ 0.52
COMMD4-224ENST00000568877 HS2ST1Q7LGA3 356 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 POMGNT1Q8WZA1 660 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 LPPQ93052 612 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-224ENST00000568877 ZBED2Q9BTP6 218 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 KCTD10Q9H3F6 313 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 SNTG2Q9NY99 539 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 CGNQ9P2M7 1197 aaKnown RBP18.3■□□□□ 0.52
COMMD4-224ENST00000568877 CEP290O15078 2479 aa18.3■□□□□ 0.52
COMMD4-224ENST00000568877 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-224ENST00000568877 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-224ENST00000568877 MEIS3P2A8K0S8 358 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 HOXA2O43364 376 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 DGKIO75912 1065 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 FGFR1P11362 822 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 GARTP22102 1010 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 AKAP5P24588 427 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 GRM5P41594 1212 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 FAM109BQ6ICB4 259 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-224ENST00000568877 ARMCX5Q6P1M9 558 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 AGMOQ6ZNB7 445 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 THNSL1Q8IYQ7 743 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 ADSSL1Q8N142 457 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 CEP120Q8N960 986 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 GOLGA5Q8TBA6 731 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 APOL6Q9BWW8 343 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 UBN1Q9NPG3 1134 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 AGPAT3Q9NRZ7 376 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 RNF19AQ9NV58 838 aa18.29■□□□□ 0.52
COMMD4-224ENST00000568877 TYW1Q9NV66 732 aaKnown RBP18.29■□□□□ 0.52
COMMD4-224ENST00000568877 GRXCR1A8MXD5 290 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 PDXKO00764 312 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 OGTO15294 1046 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 PPP1R2P41236 205 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 OSTNP61366 133 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 HTRA4P83105 476 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-224ENST00000568877 STIM1Q13586 685 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 KYAT1Q16773 422 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 RAD9AQ99638 391 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 CBWD1Q9BRT8 395 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-224ENST00000568877 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 PARP2Q9UGN5 583 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 AGO2Q9UKV8 859 aaKnown RBP18.28■□□□□ 0.52
COMMD4-224ENST00000568877 GIT1Q9Y2X7 761 aa18.28■□□□□ 0.52
COMMD4-224ENST00000568877 TTC3P53804 2025 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 PPP1R3GB7ZBB8 358 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 CALUO43852 315 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-224ENST00000568877 TLL1O43897 1013 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 FAM189A1O60320 539 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 OFD1O75665 1012 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 CD44P16070 742 aaKnown RBP18.27■□□□□ 0.52
COMMD4-224ENST00000568877 RABGGTBP53611 331 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 SEZ6Q53EL9 994 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 CLLU1OSQ5K130 101 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 GLB1LQ6UWU2 654 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 C12orf56Q8IXR9 622 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 HELQQ8TDG4 1101 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 ZNF689Q96CS4 500 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-224ENST00000568877 DHTKD1Q96HY7 919 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-224ENST00000568877 ACAP3Q96P50 834 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 YME1L1Q96TA2 773 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 PCIF1Q9H4Z3 704 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 TRAF3IP3Q9Y228 551 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 INSL6Q9Y581 213 aa18.27■□□□□ 0.52
COMMD4-224ENST00000568877 PSMA7O14818 248 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 KIAA0391O15091 583 aaKnown RBP18.26■□□□□ 0.51
COMMD4-224ENST00000568877 CLIC2O15247 247 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 RECQL4O94761 1208 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 CLTAP09496 248 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 ACOT2P49753 483 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms