RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 EXOC8Q8IYI6 725 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 ADSSL1Q8N142 457 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 ADAM2Q99965 735 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 SUCLA2Q9P2R7 463 aaPredicted RBP12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
SNAPC5-208ENST00000568875 POTEMA6NI47 508 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 C9IYK1 514 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 KIF5CO60282 957 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 ZRANB2O95218 330 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 GYPCP04921 128 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 LINC00271P0C7V0 271 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 UBA7P41226 1012 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 GRB10Q13322 594 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 NPAS4Q8IUM7 802 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 NEK9Q8TD19 979 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 NELFBQ8WX92 580 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 CARD6Q9BX69 1037 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 THAP9Q9H5L6 903 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 PRDM4Q9UKN5 801 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 MTUS1Q9ULD2 1270 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 MYO7AQ13402 2215 aa12.69□□□□□ -0.38
SNAPC5-208ENST00000568875 A0A087WZ62 844 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 OR52Z1P0C646 297 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CASP1P29466 404 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 RFC5P40937 340 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 TECP42680 631 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CLCN6P51797 869 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 PPP2R3AQ06190 1150 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 EPC2Q52LR7 807 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 COBLL1Q53SF7 1204 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 NAALADL2Q58DX5 795 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 TMCO3Q6UWJ1 677 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 SLC24A5Q71RS6 500 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 RSRC2Q7L4I2 434 aaKnown RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 SLC7A3Q8WY07 619 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CCDC47Q96A33 483 aaKnown RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 DHTKD1Q96HY7 919 aaPredicted RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 SAMD11Q96NU1 681 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 WDR24Q96S15 920 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 FDXACB1Q9BRP7 624 aaPredicted RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 BLZF1Q9H2G9 400 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 ANKEF1Q9NU02 776 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 ZNF446Q9NWS9 450 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 DENND3A2RUS2 1198 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 PSMA7O14818 248 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 STAG3L1P0CL83 205 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CASP14P31944 242 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 PRCPP42785 496 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 KCNJ12Q14500 433 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CCDC85BQ15834 202 aaPredicted RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 ZNF410Q86VK4 478 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 RHPN2Q8IUC4 686 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 KSR1Q8IVT5 923 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 TMEM192Q8IY95 271 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 SMYD4Q8IYR2 804 aaPredicted RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 FIBCD1Q8N539 461 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 PRPF31Q8WWY3 499 aaKnown RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 CLP1Q92989 425 aaKnown RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 GCOM2Q9BZD3 368 aaPredicted RBP12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 C1orf112Q9NSG2 853 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 LMCD1Q9NZU5 365 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 COL4A6Q14031 1691 aa12.68□□□□□ -0.38
SNAPC5-208ENST00000568875 SOWAHDA6NJG2 315 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 GAS2O43903 313 aaKnown RBP12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 MED24O75448 989 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 TUBBP07437 444 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 POLGP54098 1239 aaPredicted RBP12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 PTPN21Q16825 1174 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 ZNF662Q6ZS27 426 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 CEP112Q8N8E3 955 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 LRRN4CLQ8ND94 238 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 FBXO22Q8NEZ5 403 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 GDPD5Q8WTR4 605 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 TMEM143Q96AN5 459 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 IQCDQ96DY2 449 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 IFT122Q9HBG6 1241 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
SNAPC5-208ENST00000568875 XPNPEP1Q9NQW7 623 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms