RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CDH24Q86UP0 819 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 LSRQ86X29 649 aaPredicted RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 ITPRIPQ8IWB1 547 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 FTSJ3Q8IY81 847 aaKnown RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 LRRC47Q8N1G4 583 aaKnown RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 CLASRPQ8N2M8 674 aaKnown RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 MFSD2AQ8NA29 543 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 RBBP8NLQ8NC74 664 aaPredicted RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 GMCL1P1Q8NEA9 526 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 TMEM40Q8WWA1 233 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 CHMP4CQ96CF2 233 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 CEP95Q96GE4 821 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 HEXIM2Q96MH2 286 aaKnown RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 KIF2CQ99661 725 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 MIPEPQ99797 713 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 WDR11Q9BZH6 1224 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 PUS7LQ9H0K6 701 aaKnown RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 BOLA2Q9H3K6 86 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 CNNM2Q9H8M5 875 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 VTA1Q9NP79 307 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 CYP39A1Q9NYL5 469 aa6.65□□□□□ -1.34
CDH13-211ENST00000568770 ISY1Q9ULR0 285 aaKnown RBP6.65□□□□□ -1.34
CDH13-211ENST00000568770 PRR19A6NJB7 356 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 GSG1L2A8MUP6 293 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 DCXO43602 365 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 PRDM1O75626 825 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 TTLL1O95922 423 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 NME1P15531 152 aaKnown RBP6.64□□□□□ -1.35
CDH13-211ENST00000568770 ETFBP38117 255 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 IKQ13123 557 aaPredicted RBP6.64□□□□□ -1.35
CDH13-211ENST00000568770 BFSP2Q13515 415 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 TKFCQ3LXA3 575 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 SBK1Q52WX2 424 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 HSP90AB4PQ58FF6 505 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 SLFN13Q68D06 897 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 NFRKBQ6P4R8 1299 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 RPAP2Q8IXW5 612 aaPredicted RBP6.64□□□□□ -1.35
CDH13-211ENST00000568770 ZNF444Q8N0Y2 327 aaPredicted RBP6.64□□□□□ -1.35
CDH13-211ENST00000568770 OR6J1Q8NGC5 347 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 MORC4Q8TE76 937 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 ANKS1AQ92625 1134 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 RAD9AQ99638 391 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 HAUS7Q99871 368 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 KCNH6Q9H252 994 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 MTMR4Q9NYA4 1195 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 SYNPO2Q9UMS6 1093 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 ZFHX2Q9C0A1 2572 aaPredicted RBP6.64□□□□□ -1.35
CDH13-211ENST00000568770 DCHS1Q96JQ0 3298 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 TECTAO75443 2155 aa6.64□□□□□ -1.35
CDH13-211ENST00000568770 LINC01553A4QN01 128 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 H3BQ06 376 aaPredicted RBP6.63□□□□□ -1.35
CDH13-211ENST00000568770 UBOX5O94941 541 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 GJB5O95377 273 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 ATP5JP18859 108 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 SLC1A4P43007 532 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
CDH13-211ENST00000568770 CHMP4BP1P59074 171 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 ERVK-21P61565 698 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 GPNMBQ14956 572 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 PTGISQ16647 500 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 LRRFIP1Q32MZ4 808 aaKnown RBP6.63□□□□□ -1.35
CDH13-211ENST00000568770 ZSCAN25Q6NSZ9 544 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 LETMD1Q6P1Q0 360 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 NSMFQ6X4W1 530 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 NLRC3Q7RTR2 1065 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 FAM160B2Q86V87 743 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 NEK9Q8TD19 979 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 CHURC1Q8WUH1 139 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 CPLX3Q8WVH0 158 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 STAG1Q8WVM7 1258 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 KIF1BPQ96EK5 621 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 TGS1Q96RS0 853 aaKnown RBP6.63□□□□□ -1.35
CDH13-211ENST00000568770 STRBPQ96SI9 672 aaKnown RBP6.63□□□□□ -1.35
CDH13-211ENST00000568770 ZDBF2Q9HCK1 2354 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 FRYLO94915 3013 aa6.63□□□□□ -1.35
CDH13-211ENST00000568770 KAT6AQ92794 2004 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 RAD50Q92878 1312 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 RGS13O14921 159 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 KPNA6O60684 536 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 TSPY3P0CV98 308 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 TSPY8P0CW00 308 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 IMPDH2P12268 514 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 MCCP23508 829 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 TDO2P48775 406 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 ALDH5A1P51649 535 aaPredicted RBP6.62□□□□□ -1.35
CDH13-211ENST00000568770 ZP2Q05996 745 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 BAATQ14032 418 aaPredicted RBP6.62□□□□□ -1.35
CDH13-211ENST00000568770 TCTN1Q2MV58 587 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 BRDTQ58F21 947 aaPredicted RBP6.62□□□□□ -1.35
CDH13-211ENST00000568770 CNKSR3Q6P9H4 555 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 GIMAP6Q6P9H5 292 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 KCTD1Q719H9 257 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 CAGE1Q8TC20 777 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 AFAP1L1Q8TED9 768 aa6.62□□□□□ -1.35
CDH13-211ENST00000568770 CYB5D2Q8WUJ1 264 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms