RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZNF746Q6NUN9 644 aaPredicted RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 SHC4Q6S5L8 630 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 B3GNT9Q6UX72 402 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 USP49Q70CQ1 688 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 IGSF22Q8N9C0 903 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 ERMNQ8TAM6 284 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 SEPT1Q8WYJ6 367 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 NXPE3Q969Y0 559 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 EPSTI1Q96J88 318 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 PLIN2Q99541 437 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 GPR20Q99678 358 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 EIF2AK1Q9BQI3 630 aaKnown RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMG1-214ENST00000568038 RNF208Q9H0X6 261 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 DISC1Q9NRI5 854 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 RGL1Q9NZL6 768 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 DDX20Q9UHI6 824 aaKnown RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 Q9Y3F1 56 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 A0A087WWV3 80 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 GSTTP1A0A1W2PQM5 241 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 MYADML2A6NDP7 307 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 SUPT20HL2P0C7V6 817 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 CCL5P13501 91 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 EDN3P14138 238 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 SSTR4P31391 388 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 SFNP31947 248 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 MCM4P33991 863 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 TCF7P36402 384 aaPredicted RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 UBA7P41226 1012 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 JAK3P52333 1124 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 EHHADHQ08426 723 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 CTTNQ14247 550 aaKnown RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 KRT79Q5XKE5 535 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 SWSAP1Q6NVH7 229 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 MIS18BP1Q6P0N0 1132 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 ABHD15Q6UXT9 468 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 TRMT1LQ7Z2T5 733 aaKnown RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 CABP7Q86V35 215 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 TPH2Q8IWU9 490 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 SMAP1Q8IYB5 467 aaPredicted RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 ARMC10Q8N2F6 343 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
SMG1-214ENST00000568038 TMEM87AQ8NBN3 555 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 RASSF8Q8NHQ8 419 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 PPTC7Q8NI37 304 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 DYDC2Q96IM9 177 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 AK8Q96MA6 479 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 PANK2Q9BZ23 570 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 MCOLN1Q9GZU1 580 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 SPC25Q9HBM1 224 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 OSGEPQ9NPF4 335 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 XPNPEP3Q9NQH7 507 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 LATS2Q9NRM7 1088 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 GABBR1Q9UBS5 961 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 PCDHA10Q9Y5I2 948 aa8.65□□□□□ -1.02
SMG1-214ENST00000568038 SYNRGQ9UMZ2 1314 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 A0A1B0GVL5 298 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 MSCO60682 206 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 MED24O75448 989 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 P4HBP07237 508 aaKnown RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 MMP3P08254 477 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 MYL3P08590 195 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 ZNF286BP0CG31 522 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 CMA1P23946 247 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 GJA9P57773 515 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 CHMP4BP1P59074 171 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 KARSQ15046 597 aaKnown RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 ECM1Q16610 540 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 FSCN1Q16658 493 aaKnown RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 UGCGQ16739 394 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 DGKDQ16760 1214 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 BRDTQ58F21 947 aaPredicted RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 RESP18Q5W5W9 173 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 HAUS3Q68CZ6 603 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 CATSPER3Q86XQ3 398 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 CCDC60Q8IWA6 550 aaPredicted RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 PDILTQ8N807 584 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 FSIP1Q8NA03 581 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 RDM1Q8NG50 284 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 BSNDQ8WZ55 320 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 GLG1Q92896 1179 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 CDK5RAP3Q96JB5 506 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 ZNF333Q96JL9 665 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 DEFB118Q96PH6 123 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 PCYT2Q99447 389 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 MMTAG2Q9BU76 263 aaKnown RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 UPF3AQ9H1J1 476 aaKnown RBP8.64□□□□□ -1.03
SMG1-214ENST00000568038 GOLPH3LQ9H4A5 285 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 AZI2Q9H6S1 392 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 ZNF302Q9NR11 478 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 LMBRD1Q9NUN5 540 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 SOX13Q9UN79 622 aa8.64□□□□□ -1.03
SMG1-214ENST00000568038 A0A087X0B3 334 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 A0A1W2PQ27 194 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 A0A1W2PQ64 194 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 A0A1W2PQD8 194 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 SOX1O00570 391 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms