RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 UPF3BQ9BZI7 483 aaKnown RBP6.14□□□□□ -1.43
CAPN3-217ENST00000567817 TSPY26PQ9H489 355 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 SMOC1Q9H4F8 434 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 ZCCHC4Q9H5U6 513 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 BICC1Q9H694 974 aaKnown RBP6.14□□□□□ -1.43
CAPN3-217ENST00000567817 PARD6AQ9NPB6 346 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 GPR108Q9NPR9 543 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 MYOTQ9UBF9 498 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 NOL7Q9UMY1 257 aaKnown RBP6.14□□□□□ -1.43
CAPN3-217ENST00000567817 AKAP11Q9UKA4 1901 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 ELP1O95163 1332 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 RPAP1Q9BWH6 1393 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-217ENST00000567817 MED23Q9ULK4 1368 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 CACNA1SQ13698 1873 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 TCRBV5S2A0A599 114 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 BLACEA4D250 179 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 SH3D21A4FU49 640 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 FAM221BA6H8Z2 402 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 AQP7O14520 342 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 SASH1O94885 1247 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 CAVIN2O95810 425 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 CASTP20810 708 aaKnown RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 VMACQ2NL98 169 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 BLOC1S2Q6QNY1 142 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 COPS6Q7L5N1 327 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 LINC00482Q8N8I6 264 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 TP53I13Q8NBR0 393 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 PTPRN2Q92932 1015 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 JAKMIP1Q96N16 626 aaKnown RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 NOX5Q96PH1 765 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 YIPF4Q9BSR8 244 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 TMX4Q9H1E5 349 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 SLC6A20Q9NP91 592 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 RRAGDQ9NQL2 400 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 DTLQ9NZJ0 730 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 PPARGC1AQ9UBK2 798 aaKnown RBP6.13□□□□□ -1.43
CAPN3-217ENST00000567817 RIC1Q4ADV7 1423 aa6.13□□□□□ -1.43
CAPN3-217ENST00000567817 ZNF500O60304 480 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 CIAO1O76071 339 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 SOD2P04179 222 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 IGKV5-2P06315 115 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 SYT1P21579 422 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 IL15P40933 162 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 FKBP1BP68106 108 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 KRT85P78386 507 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 KIF23Q02241 960 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 DLX2Q07687 328 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 PROSER3Q2NL68 480 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 FOXB2Q5VYV0 432 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 CREB3L3Q68CJ9 461 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 ATL3Q6DD88 541 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 CD300LDQ6UXZ3 194 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 LIPIQ6XZB0 460 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 OTOP3Q7RTS5 596 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 RBBP6Q7Z6E9 1792 aaKnown RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 UBR2Q8IWV8 1755 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 SUPT20HQ8NEM7 779 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 SH3TC1Q8TE82 1336 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 ZBTB8AQ96BR9 441 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 EAF2Q96CJ1 260 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 KAZALD1Q96I82 304 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 ABCC12Q96J65 1359 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 EXOC2Q96KP1 924 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 DNAJC2Q99543 621 aaKnown RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 GORASP1Q9BQQ3 440 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 ALG1Q9BT22 464 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 JAM3Q9BX67 310 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 GLIS2Q9BZE0 524 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 SCAND2PQ9GZW5 306 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 OSBPL2Q9H1P3 480 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 GBA2Q9HCG7 927 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 ASH2LQ9UBL3 628 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 NUB1Q9Y5A7 615 aa6.12□□□□□ -1.43
CAPN3-217ENST00000567817 RBM8AQ9Y5S9 174 aaKnown RBP6.12□□□□□ -1.43
CAPN3-217ENST00000567817 SIPA1L3O60292 1781 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 SYCE3A1L190 88 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 FAM47E-STBD1D6RA91 191 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 SLC27A2O14975 620 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 CAMTA2O94983 1202 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 ANXA1P04083 346 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 C6orf222P0C671 652 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 NAT1P18440 290 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 RPS6KB1P23443 525 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 GABREP78334 506 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 NKX3-2P78367 333 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 HMGN5P82970 282 aaKnown RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 SPIRE1Q08AE8 756 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 TNIP1Q15025 636 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 CR1LQ2VPA4 569 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 CRY2Q49AN0 593 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 MCMDC2Q4G0Z9 681 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 FAM209AQ5JX71 171 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 TRIM48Q8IWZ4 208 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 FAM26EQ8N5C1 309 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 KYQ8NBH2 561 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 ARRDC4Q8NCT1 418 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms