RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DNAJB4Q9UDY4 337 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 DAXXQ9UER7 740 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 BARX2Q9UMQ3 279 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 IPPQ9Y573 584 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 PCDHB6Q9Y5E3 794 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PDCD11Q14690 1871 aaKnown RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 A0A1B0GUA9 196 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 C2orf71A6NGG8 1288 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 ARL5CA6NH57 179 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 N4BP3O15049 544 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 GPR37L1O60883 481 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 NR1I2O75469 434 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 DDHD2O94830 711 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 CXCL14O95715 111 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 POMCP01189 267 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 ALDH2P05091 517 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 CTSAP10619 480 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 ALADP13716 330 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 HOXB8P17481 243 aaPredicted RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 MLH1P40692 756 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 NAMPTP43490 491 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 SLC11A1P49279 550 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 AFF1P51825 1210 aaKnown RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 EFNA5P52803 228 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 ECM1Q16610 540 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 MAPK6Q16659 721 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 KRT79Q5XKE5 535 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 ANKRD54Q6NXT1 300 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 TMEM173Q86WV6 379 aaPredicted RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 ZNF280BQ86YH2 543 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 KCTD17Q8N5Z5 321 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 TMEM87AQ8NBN3 555 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 SNX29Q8TEQ0 813 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 SUSD6Q92537 303 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 KIFAP3Q92845 792 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 CASP10Q92851 521 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 IFT74Q96LB3 600 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 EIF2AQ9BY44 585 aaKnown RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 CCDC113Q9H0I3 377 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 GBP3Q9H0R5 595 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 BHMT2Q9H2M3 363 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 FZD8Q9H461 694 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 NXF3Q9H4D5 531 aaKnown RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 EPHX3Q9H6B9 360 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 DDX19AQ9NUU7 478 aaKnown RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 KIAA1024Q9UPX6 916 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 SMC3Q9UQE7 1217 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 FAN1Q9Y2M0 1017 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 GIT1Q9Y2X7 761 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 USP15Q9Y4E8 981 aaPredicted RBP5.29□□□□□ -1.56
CLK3-219ENST00000567805 HES2Q9Y543 173 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 HCFC2Q9Y5Z7 792 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 IRAK3Q9Y616 596 aa5.29□□□□□ -1.56
CLK3-219ENST00000567805 PHLPP2Q6ZVD8 1323 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 PP2D1A8MPX8 630 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 LOC730098B7Z3J9 87 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 ACKR2O00590 384 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 NRP1O14786 923 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 B4GALT5O43286 388 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 DCXO43602 365 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 B4GALT3O60512 393 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 CLASP2O75122 1294 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 NPTXRO95502 500 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 SOD2P04179 222 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 PRKCBP05771 671 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 COL9A1P20849 921 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 AKAP5P24588 427 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 CA8P35219 290 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 OR1G1P47890 313 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 SCNN1GP51170 649 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 RBM10P98175 930 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 ATP2C1P98194 919 aaPredicted RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 ITIH3Q06033 890 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 DSC1Q08554 894 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 GRIK3Q13003 919 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 PRPF4BQ13523 1007 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 PTPN14Q15678 1187 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 IL17AQ16552 155 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 TMEM31Q5JXX7 168 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 HYIQ5T013 277 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 LARP1BQ659C4 914 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 ARL6IP4Q66PJ3 421 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 CES5AQ6NT32 575 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 LLGL2Q6P1M3 1020 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 BRAPQ7Z569 592 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 APBB1IPQ7Z5R6 666 aaPredicted RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 PPFIBP1Q86W92 1011 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 COLGALT2Q8IYK4 626 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 DEPTORQ8TB45 409 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 BCL7CQ8WUZ0 217 aaPredicted RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 BSNDQ8WZ55 320 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 AK8Q96MA6 479 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 DRC1Q96MC2 740 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 ZFP42Q96MM3 310 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 NECTIN4Q96NY8 510 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms