RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 STPG1Q5TH74 334 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 PSAPL1Q6NUJ1 521 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 CEP68Q76N32 757 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 ZNF410Q86VK4 478 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 TEX2Q8IWB9 1127 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 GPR65Q8IYL9 337 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 FAM160A2Q8N612 972 aaPredicted RBP15.5■□□□□ 0.07
SMG1-213ENST00000567737 ITFG1Q8TB96 612 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 IGDCC4Q8TDY8 1250 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 DNASE1L2Q92874 299 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
SMG1-213ENST00000567737 LSM14BQ9BX40 385 aaKnown RBP15.5■□□□□ 0.07
SMG1-213ENST00000567737 CNOT1A5YKK6 2376 aaKnown RBP15.49■□□□□ 0.07
SMG1-213ENST00000567737 CHURC1-FNTBB4DL54 471 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 FAM86B1E9PN63 330 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 ECI2O75521 394 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 FAM86B2P0C5J1 330 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 FNTBP49356 437 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 DNM2P50570 870 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 SATB1Q01826 763 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 PRKCEQ02156 737 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 DRP2Q13474 957 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 USP41Q3LFD5 358 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 MRPL10Q7Z7H8 261 aaKnown RBP15.49■□□□□ 0.07
SMG1-213ENST00000567737 LONP2Q86WA8 852 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 NPAS3Q8IXF0 933 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 LMAN1LQ9HAT1 526 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 RIC8AQ9NPQ8 531 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 WDR70Q9NW82 654 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 FBXW11Q9UKB1 542 aa15.49■□□□□ 0.07
SMG1-213ENST00000567737 MTCL1Q9Y4B5 1905 aaKnown RBP15.49■□□□□ 0.07
SMG1-213ENST00000567737 CEP295Q9C0D2 2601 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 RALGAPA1Q6GYQ0 2036 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 MYH9P35579 1960 aaKnown RBP15.48■□□□□ 0.07
SMG1-213ENST00000567737 SHISA7A6NL88 538 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 CCL16O15467 120 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 CYP21A2P08686 494 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 ZNF806P0C7X5 589 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 RPL17P18621 184 aaKnown RBP15.48■□□□□ 0.07
SMG1-213ENST00000567737 HOXA9P31269 272 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 ADCY7P51828 1080 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 NAPAP54920 295 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 FOXC1Q12948 553 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 AP3B2Q13367 1082 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 NFXL1Q6ZNB6 911 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 CCDC82Q8N4S0 544 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 FAM3CQ92520 227 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 LARP6Q9BRS8 491 aaKnown RBP15.48■□□□□ 0.07
SMG1-213ENST00000567737 COLEC11Q9BWP8 271 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 ADAM33Q9BZ11 813 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 RXFP3Q9NSD7 469 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 KCNH3Q9ULD8 1083 aa15.48■□□□□ 0.07
SMG1-213ENST00000567737 ZNF862O60290 1169 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 C8AP07357 584 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
SMG1-213ENST00000567737 FUT10Q6P4F1 479 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 RHPN2Q8IUC4 686 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 ZNF687Q8N1G0 1237 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 PLA2G2FQ9BZM2 168 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 ARRDC1-AS1Q9H2J1 176 aa15.47■□□□□ 0.07
SMG1-213ENST00000567737 IGLV3-22A0A075B6J6 115 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 CCDC69A6NI79 296 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 WDR64B1ANS9 1081 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 E7EWF7 191 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 F8W810 466 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 AXIN1O15169 862 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 CALM1P0DP23 149 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 CALM2P0DP24 149 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 CALM3P0DP25 149 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 ITGA4P13612 1032 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 RXRAP19793 462 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 NOVA1P51513 510 aaKnown RBP15.46■□□□□ 0.07
SMG1-213ENST00000567737 ANTXR2P58335 489 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 CCDC6Q16204 474 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 PABPC1LQ4VXU2 614 aaKnown RBP15.46■□□□□ 0.07
SMG1-213ENST00000567737 HEATR6Q6AI08 1181 aaKnown RBP15.46■□□□□ 0.07
SMG1-213ENST00000567737 WWC2Q6AWC2 1192 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 PPP1R18Q6NYC8 613 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 CNNM3Q8NE01 707 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 TMC2Q8TDI7 906 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 ING5Q8WYH8 240 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 NLRP4Q96MN2 994 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 GPR62Q9BZJ7 368 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 BRD9Q9H8M2 597 aa15.46■□□□□ 0.07
SMG1-213ENST00000567737 SUCLA2Q9P2R7 463 aaPredicted RBP15.46■□□□□ 0.07
SMG1-213ENST00000567737 MRPS23Q9Y3D9 190 aaKnown RBP15.46■□□□□ 0.07
SMG1-213ENST00000567737 NCLP19338 710 aaKnown RBP15.45■□□□□ 0.06
SMG1-213ENST00000567737 SPINK2P20155 84 aa15.45■□□□□ 0.06
SMG1-213ENST00000567737 DSC1Q08554 894 aa15.45■□□□□ 0.06
SMG1-213ENST00000567737 ZNF252P-AS1Q0IIN9 211 aa15.45■□□□□ 0.06
SMG1-213ENST00000567737 TARBP2Q15633 366 aaKnown RBP15.45■□□□□ 0.06
SMG1-213ENST00000567737 MTERF2Q49AM1 385 aa15.45■□□□□ 0.06
SMG1-213ENST00000567737 CASC1Q6TDU7 716 aa15.45■□□□□ 0.06
SMG1-213ENST00000567737 PRSS55Q6UWB4 352 aaPredicted RBP15.45■□□□□ 0.06
SMG1-213ENST00000567737 SPEM1Q8N4L4 309 aa15.45■□□□□ 0.06
SMG1-213ENST00000567737 ZCCHC14Q8WYQ9 949 aaKnown RBP15.45■□□□□ 0.06
SMG1-213ENST00000567737 ELSPBP1Q96BH3 223 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms