RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 H3BUI4 141 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ACKR2O00590 384 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 MAFKO60675 156 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 FGF18O76093 207 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 VAV1P15498 845 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 EDNRBP24530 442 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 RAD52P43351 418 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 APBA1Q02410 837 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 SEC23AQ15436 765 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 PFKFB4Q16877 469 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC35G1Q2M3R5 365 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 NBPF8Q3BBV2 869 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ARL13BQ3SXY8 428 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ZACNQ401N2 412 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 FIGNQ5HY92 759 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ANKRD45Q5TZF3 282 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 JMJD6Q6NYC1 403 aaPredicted RBP3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 CEP68Q76N32 757 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 MIGA2Q7L4E1 593 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 TMTC1Q8IUR5 882 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 PCYOX1LQ8NBM8 494 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC30A5Q8TAD4 765 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 PIP4K2CQ8TBX8 421 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 TSPEARQ8WU66 669 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 NELL1Q92832 810 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 BORCS6Q96GS4 357 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 TCTN2Q96GX1 697 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 RAX2Q96IS3 184 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 Q96M66 194 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 NELL2Q99435 816 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 CNPPD1Q9BV87 410 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 HDAC8Q9BY41 377 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 NSUN3Q9H649 340 aaKnown RBP3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ATP6V0A4Q9HBG4 840 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 PRDM7Q9NQW5 492 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 KCNH7Q9NS40 1196 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 MARCH2Q9P0N8 246 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 USP36Q9P275 1121 aaKnown RBP3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 FBXO10Q9UK96 956 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC39A10Q9ULF5 831 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 SIK3Q9Y2K2 1263 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 B3GALT1Q9Y5Z6 326 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ATP23Q9Y6H3 246 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 USP19O94966 1318 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 CNTNAP4Q9C0A0 1308 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 C7orf72A4D263 438 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 AQP12BA6NM10 295 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 PHGDHO43175 533 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 NUAK1O60285 661 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 IL18RAPO95256 599 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 CKMT1AP12532 417 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 HOXA5P20719 270 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 BMP8BP34820 402 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 IL12RB1P42701 662 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 ARL4CP56559 192 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 DAG1Q14118 895 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 SPIDRQ14159 915 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 FGL2Q14314 439 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 SNX17Q15036 470 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 CCNG2Q16589 344 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 RTP2Q5QGT7 225 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 MFSD4BQ5TF39 518 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 PRAMEF9Q5VWM5 478 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 ERICH6BQ5W0A0 696 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 ATG14Q6ZNE5 492 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 ANKRD23Q86SG2 305 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 LRRTM4Q86VH4 590 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 PHYKPLQ8IUZ5 450 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 RBM12BQ8IXT5 1001 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 SH3RF2Q8TEC5 729 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 HDAC10Q969S8 669 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 MTFMTQ96DP5 389 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC35A4Q96G79 324 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 PTCHD1Q96NR3 888 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 TUBGCP5Q96RT8 1024 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 DIRC2Q96SL1 478 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 MYL10Q9BUA6 226 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 DUSP23Q9BVJ7 150 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 FOXP3Q9BZS1 431 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 UNKQ9C0B0 810 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 CDIP1Q9H305 208 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 CNTD2Q9H8S5 307 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 ANKEF1Q9NU02 776 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 RIC8BQ9NVN3 520 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 AASSQ9UDR5 926 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 DSEQ9UL01 958 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 ISY1Q9ULR0 285 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 PLAGL2Q9UPG8 496 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 COA3Q9Y2R0 106 aaPredicted RBP3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 PCDHA13Q9Y5I0 950 aa3.85□□□□□ -1.79
HERPUD1-211ENST00000566550 UBA6A0AVT1 1052 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 B4E171 279 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 FOXN3O00409 490 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 IPO5O00410 1097 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ELL2O00472 640 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 FOXP2O15409 715 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 NPHS1O60500 1241 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 DGKIO75912 1065 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 INMTO95050 263 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms