RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 NAMPTP43490 491 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 FMO5P49326 533 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 PEX3P56589 373 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 EMC2Q15006 297 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 FAM102BQ5T8I3 360 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 HGSNATQ68CP4 663 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 SYT10Q6XYQ8 523 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 SEPT14Q6ZU15 432 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 SCFD2Q8WU76 684 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-210ENST00000566290 EMID1Q96A84 441 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-210ENST00000566290 PCYT2Q99447 389 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 JPH2Q9BR39 696 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-210ENST00000566290 ZNF576Q9H609 170 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 KMT5AQ9NQR1 393 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 CLIC2O15247 247 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 DYNC1LI2O43237 492 aaPredicted RBP18.26■□□□□ 0.51
RAB40C-210ENST00000566290 EXOC3O60645 756 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 GGPS1O95749 300 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 KRT13P13646 458 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 DNAJB2P25686 324 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 PON1P27169 355 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 ARL2P36404 184 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 VAV2P52735 878 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 ACLYP53396 1101 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 SNX17Q15036 470 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 SFMBT2Q5VUG0 894 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 IQSEC1Q6DN90 963 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 USP37Q86T82 979 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 TMC2Q8TDI7 906 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 SLC7A3Q8WY07 619 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 COPS5Q92905 334 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 CCDC42Q96M95 316 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 GPR20Q99678 358 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 KIAA1586Q9HCI6 787 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 SIX2Q9NPC8 291 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 LUC7LQ9NQ29 371 aaKnown RBP18.26■□□□□ 0.51
RAB40C-210ENST00000566290 THEGQ9P2T0 379 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 STYXL1Q9Y6J8 313 aa18.26■□□□□ 0.51
RAB40C-210ENST00000566290 TCF20Q9UGU0 1960 aaKnown RBP18.25■□□□□ 0.51
RAB40C-210ENST00000566290 SLC16A4O15374 487 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 PJA2O43164 708 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 KRT86O43790 486 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 MAFO75444 373 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-210ENST00000566290 ARIH2O95376 493 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 UCHL3P15374 230 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 CST5P28325 142 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-210ENST00000566290 GTF2H1P32780 548 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 STAT5BP51692 787 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 JAM2P57087 298 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 NKX3-2P78367 333 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 RRAGAQ7L523 313 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 ACRBPQ8NEB7 543 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 NECAB3Q96P71 396 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-210ENST00000566290 TMEM134Q9H6X4 195 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 GPRC5CQ9NQ84 441 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 HSPBP1Q9NZL4 362 aa18.25■□□□□ 0.51
RAB40C-210ENST00000566290 IGKV6-21A0A0C4DH24 114 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 DENND3A2RUS2 1198 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 TMEM150BA6NC51 233 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 ASGR1P07306 291 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 KIF11P52732 1056 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 POLGP54098 1239 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-210ENST00000566290 GNG11P61952 73 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 MRPS5P82675 430 aaKnown RBP18.24■□□□□ 0.51
RAB40C-210ENST00000566290 SPA17Q15506 151 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 DUSP28Q4G0W2 176 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 DCAF17Q5H9S7 520 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-210ENST00000566290 GNASQ5JWF2 1037 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 C10orf76Q5T2E6 689 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 ATP8B4Q8TF62 1192 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 TCP11Q8WWU5 503 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 BSNDQ8WZ55 320 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 TSEN34Q9BSV6 310 aaKnown RBP18.24■□□□□ 0.51
RAB40C-210ENST00000566290 POLR3FQ9H1D9 316 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-210ENST00000566290 AZI2Q9H6S1 392 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 MLXIPQ9HAP2 919 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 GCNT4Q9P109 453 aa18.24■□□□□ 0.51
RAB40C-210ENST00000566290 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-210ENST00000566290 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-210ENST00000566290 ANO9A1A5B4 782 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 SLU7O95391 586 aaKnown RBP18.23■□□□□ 0.51
RAB40C-210ENST00000566290 CASQ1P31415 396 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 TCF7P36402 384 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-210ENST00000566290 CYP2J2P51589 502 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 POLR2FP61218 127 aaKnown RBP18.23■□□□□ 0.51
RAB40C-210ENST00000566290 TLE2Q04725 743 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 CETN1Q12798 172 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 CCDC85BQ15834 202 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-210ENST00000566290 TCERG1LQ5VWI1 586 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 CCDC155Q8N6L0 562 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 TIFAQ96CG3 184 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 COQ4Q9Y3A0 265 aa18.23■□□□□ 0.51
RAB40C-210ENST00000566290 COL1A2P08123 1366 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 MOXD2PA6NHM9 499 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 CCDC169A6NNP5 214 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms