RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 FOXO4P98177 505 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 STK3Q13188 491 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 FGL2Q14314 439 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 EIF4HQ15056 248 aaKnown RBP6.22□□□□□ -1.41
CNOT1-209ENST00000566240 KHDC1Q4VXA5 237 aaKnown RBP6.22□□□□□ -1.41
CNOT1-209ENST00000566240 MPZL3Q6UWV2 235 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 TAS1R1Q7RTX1 841 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 DPP9Q86TI2 863 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 RSPH3Q86UC2 560 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 PIK3C3Q8NEB9 887 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 PHKBQ93100 1093 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 C22orf23Q9BZE7 217 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 ZMAT3Q9HA38 289 aaKnown RBP6.22□□□□□ -1.41
CNOT1-209ENST00000566240 ATP6V0A4Q9HBG4 840 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 DCP1AQ9NPI6 582 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-209ENST00000566240 LMBRD1Q9NUN5 540 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 MBD1Q9UIS9 605 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-209ENST00000566240 TPCN1Q9ULQ1 816 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 PCDHA3Q9Y5H8 950 aa6.22□□□□□ -1.41
CNOT1-209ENST00000566240 ARID1BQ8NFD5 2236 aaPredicted RBP6.21□□□□□ -1.42
CNOT1-209ENST00000566240 MYOCOSA0A1B0GUC4 107 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 RHPN2P1A8MT19 583 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.21□□□□□ -1.42
CNOT1-209ENST00000566240 RASA4BC9J798 803 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 RASA4O43374 803 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 FRS3O43559 492 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 ARIH2O95376 493 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 COL6A1P12109 1028 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 PRIM2P49643 509 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 STAT5BP51692 787 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 KCNQ1P51787 676 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 PER3P56645 1201 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 TARDBPQ13148 414 aaKnown RBP eCLIP6.21□□□□□ -1.42
CNOT1-209ENST00000566240 MST1LQ2TV78 715 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 INO80DQ53TQ3 878 aaPredicted RBP6.21□□□□□ -1.42
CNOT1-209ENST00000566240 TMEM132EQ6IEE7 984 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 HEATR3Q7Z4Q2 680 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 IGDCC3Q8IVU1 814 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 CCHCR1Q8TD31 782 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 MZB1Q8WU39 189 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 MTFMTQ96DP5 389 aaKnown RBP6.21□□□□□ -1.42
CNOT1-209ENST00000566240 CYFIP2Q96F07 1278 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 SLC35A4Q96G79 324 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 APIPQ96GX9 242 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 FAM167AQ96KS9 214 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 MRGPRX4Q96LA9 322 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 SAMD11Q96NU1 681 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 UIMC1Q96RL1 719 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 VRK1Q99986 396 aaPredicted RBP6.21□□□□□ -1.42
CNOT1-209ENST00000566240 LRRC27Q9C0I9 530 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 STAP2Q9UGK3 403 aa6.21□□□□□ -1.42
CNOT1-209ENST00000566240 KLRG2A4D1S0 409 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 ZNF503-AS2A6NEH8 195 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 PHGDHO43175 533 aaKnown RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 TYRP14679 529 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 MLLT6P55198 1093 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 BTKQ06187 659 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 FZD5Q13467 585 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 SMAD4Q13485 552 aaKnown RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 PLS1Q14651 629 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 RAB39AQ14964 217 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 KRT72Q14CN4 511 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 HSP90AB4PQ58FF6 505 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 TRMT10BQ6PF06 316 aaKnown RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 PQLC1Q8N2U9 271 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 SH2D3CQ8N5H7 860 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 MSL3Q8N5Y2 521 aaKnown RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 DEPTORQ8TB45 409 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 GFM2Q969S9 779 aaKnown RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 ZBTB8AQ96BR9 441 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 EVI5LQ96CN4 794 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 LIN37Q96GY3 246 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-209ENST00000566240 RIPOR3Q96MK2 946 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 PDCD2LQ9BRP1 358 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 SELENOOQ9BVL4 669 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 BTBD1Q9H0C5 482 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 BCO1Q9HAY6 547 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 CALCOCO1Q9P1Z2 691 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 ABCF2Q9UG63 623 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 VWA7Q9Y334 891 aa6.2□□□□□ -1.42
CNOT1-209ENST00000566240 TEX51A0A1B0GUA7 166 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 A0A1W2PPL8 197 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 CCDC189A1A4V9 331 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 F5H423 210 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 RPL17P18621 184 aaKnown RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 POLD1P28340 1107 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 SREBF1P36956 1147 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 CASP5P51878 434 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 SESN2P58004 480 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 TOP3AQ13472 1001 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 TRIM68Q6AZZ1 485 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 OR2C3Q8N628 320 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 OR7D4Q8NG98 312 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 IL31RAQ8NI17 732 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 IFI44Q8TCB0 444 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 ZNF480Q8WV37 535 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms