RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 ITGA10O75578 1167 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 FTLP02792 175 aaPredicted RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 RHCEP18577 417 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 FPR1P21462 350 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 ADCY7P51828 1080 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 NEK3P51956 506 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 PER3P56645 1201 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 SESN2P58004 480 aaPredicted RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 PURAQ00577 322 aaKnown RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 RHDQ02161 417 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 HGFACQ04756 655 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 SAFB2Q14151 953 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDH1-207ENST00000564745 FAM26FQ5R3K3 315 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 SWSAP1Q6NVH7 229 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 NPNTQ6UXI9 565 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 USP30Q70CQ3 517 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 DRC7Q8IY82 874 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 TRMT2AQ8IZ69 625 aaKnown RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 ANKRD53Q8N9V6 530 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 LINC01356Q8N9X3 169 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 PJA1Q8NG27 643 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 OR7D4Q8NG98 312 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 ZNF480Q8WV37 535 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 PMM1Q92871 262 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 SLC7A6OSQ96CW6 309 aaPredicted RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 CLPTM1LQ96KA5 538 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 NT5C1BQ96P26 610 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 UHRF1Q96T88 793 aaPredicted RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 SLC38A3Q99624 504 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 C14orf93Q9H972 538 aaKnown RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 DDX21Q9NR30 783 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDH1-207ENST00000564745 TDP1Q9NUW8 608 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 GPRC5DQ9NZD1 345 aa6.13□□□□□ -1.43
CDH1-207ENST00000564745 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 ARID1BQ8NFD5 2236 aaPredicted RBP6.13□□□□□ -1.43
CDH1-207ENST00000564745 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 ENDOD1O94919 500 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 PCSK1P29120 753 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 CASRP41180 1078 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 SLURP1P55000 103 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 CDC42EP1Q00587 391 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 CCDC149Q6ZUS6 474 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 RALYLQ86SE5 291 aaKnown RBP6.12□□□□□ -1.43
CDH1-207ENST00000564745 KBTBD2Q8IY47 623 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 KLHDC4Q8TBB5 520 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 MDM1Q8TC05 714 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 TMX3Q96JJ7 454 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 LCORQ96JN0 433 aaPredicted RBP6.12□□□□□ -1.43
CDH1-207ENST00000564745 MRGPRX4Q96LA9 322 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 GPHA2Q96T91 129 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 VRK1Q99986 396 aaPredicted RBP6.12□□□□□ -1.43
CDH1-207ENST00000564745 TMEM60Q9H2L4 133 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 ARMT1Q9H993 441 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 BCO1Q9HAY6 547 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 NCDNQ9UBB6 729 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 STAP2Q9UGK3 403 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 STXBP5LQ9Y2K9 1186 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 PCDHGB6Q9Y5F9 930 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 PCDHA3Q9Y5H8 950 aa6.12□□□□□ -1.43
CDH1-207ENST00000564745 ZMYM3Q14202 1370 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
CDH1-207ENST00000564745 MROH6A6NGR9 719 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 MATN2O00339 956 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 PLIN1O60240 522 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 NUAK1O60285 661 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 B4GALT4O60513 344 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 ZBED1O96006 694 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 RAP1GAPP47736 663 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 WNT3AP56704 352 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 ZNF280AP59817 542 aaPredicted RBP6.11□□□□□ -1.43
CDH1-207ENST00000564745 NOGQ13253 232 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 KHDC1Q4VXA5 237 aaKnown RBP6.11□□□□□ -1.43
CDH1-207ENST00000564745 PRAMEF14Q5SWL7 426 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 KRT40Q6A162 431 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 TTC7BQ86TV6 843 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 KIAA0319LQ8IZA0 1049 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 IFI44Q8TCB0 444 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 CFHR4Q92496 578 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 SAMD11Q96NU1 681 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 APOL5Q9BWW9 433 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 BHMT2Q9H2M3 363 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 FAM204AQ9H8W3 233 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 AJAP1Q9UKB5 411 aaPredicted RBP6.11□□□□□ -1.43
CDH1-207ENST00000564745 NR2E1Q9Y466 385 aa6.11□□□□□ -1.43
CDH1-207ENST00000564745 PMM2O15305 246 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 ARHGAP6O43182 974 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 SGTAO43765 313 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 B4GALT3O60512 393 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 MYL3P08590 195 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 VSIG10L2P0DP72 767 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 GUCY1A2P33402 732 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 PTPN7P35236 360 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 AGFG1P52594 562 aaKnown RBP6.1□□□□□ -1.43
CDH1-207ENST00000564745 HK3P52790 923 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 ATP8B2P98198 1209 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 DUSP2Q05923 314 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 SAFBQ15424 915 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDH1-207ENST00000564745 KIAA0753Q2KHM9 967 aa6.1□□□□□ -1.43
CDH1-207ENST00000564745 CCDC157Q569K6 752 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms