RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 UBL4BQ8N7F7 174 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 SLC17A8Q8NDX2 589 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 GRHL1Q9NZI5 618 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 CYP26A1O43174 497 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
HERC2-207ENST00000564734 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 SLC47A2Q86VL8 602 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 BBXQ8WY36 941 aaPredicted RBP16.42■□□□□ 0.22
HERC2-207ENST00000564734 TLCD1Q96CP7 247 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 C18orf8Q96DM3 657 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 CENPHQ9H3R5 247 aa16.42■□□□□ 0.22
HERC2-207ENST00000564734 WNT10BO00744 389 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 GGPS1O95749 300 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 FAM107AO95990 144 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 EIF2AK2P19525 551 aaKnown RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 GPC3P51654 580 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 DGKZQ13574 1117 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 SNRNP35Q16560 246 aaKnown RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 TTC27Q6P3X3 843 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 ACP6Q9NPH0 428 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 CHORDC1Q9UHD1 332 aaPredicted RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 MMEP08473 750 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 PAEPP09466 180 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 CHRNA3P32297 505 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 JAK3P52333 1124 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 EIF3BP55884 814 aaKnown RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 PPP2R2AP63151 447 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 CYP1B1Q16678 543 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 HVCN1Q96D96 273 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 GGA2Q9UJY4 613 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 NOVA2Q9UNW9 492 aaKnown RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 DCDC2CA8MYV0 355 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 NUDT17P0C025 328 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 MFAP3P55082 362 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 DDX1Q92499 740 aaKnown RBP16.41■□□□□ 0.22
HERC2-207ENST00000564734 FBXL18Q96ME1 805 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 VPS33BQ9H267 617 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 PXMP2Q9NR77 195 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
HERC2-207ENST00000564734 VGLL3A8MV65 326 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 SFNP31947 248 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 USP8P40818 1118 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 NPTX2P47972 431 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 MESDQ14696 234 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 SIX1Q15475 284 aaPredicted RBP16.4■□□□□ 0.22
HERC2-207ENST00000564734 TTC31Q49AM3 519 aaPredicted RBP16.4■□□□□ 0.22
HERC2-207ENST00000564734 FAM102BQ5T8I3 360 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 KRT39Q6A163 491 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 SLC39A4Q6P5W5 647 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 ANO5Q75V66 913 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 MFSD14AQ96MC6 490 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 NTPCRQ9BSD7 190 aaKnown RBP16.4■□□□□ 0.22
HERC2-207ENST00000564734 TMEM8AQ9HCN3 771 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 EXOC7Q9UPT5 735 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 SNX24Q9Y343 169 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 TMEM110-MUSTN1A8MSY1 372 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 WDR64B1ANS9 1081 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
HERC2-207ENST00000564734 TRAPPC3O43617 180 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 PYGMP11217 842 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 CYP11B1P15538 503 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 CNGA1P29973 690 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 YTHDF3Q7Z739 585 aaKnown RBP16.4■□□□□ 0.22
HERC2-207ENST00000564734 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 TMC2Q8TDI7 906 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 SAAL1Q96ER3 474 aa16.4■□□□□ 0.22
HERC2-207ENST00000564734 STBD1O95210 358 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 KRT76Q01546 638 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 PPM1KQ8N3J5 372 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 C3orf20Q8ND61 904 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 POP1Q99575 1024 aaKnown RBP16.39■□□□□ 0.21
HERC2-207ENST00000564734 SENP7Q9BQF6 1050 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 BCCIPQ9P287 314 aaKnown RBP eCLIP16.39■□□□□ 0.21
HERC2-207ENST00000564734 MEFVO15553 781 aaPredicted RBP16.39■□□□□ 0.21
HERC2-207ENST00000564734 TMOD1P28289 359 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 PMS2P54278 862 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 CDR2Q01850 454 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
HERC2-207ENST00000564734 C6orf89Q6UWU4 347 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 SPIRE2Q8WWL2 714 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 RNF25Q96BH1 459 aaPredicted RBP16.39■□□□□ 0.21
HERC2-207ENST00000564734 KIFC3Q9BVG8 833 aa16.39■□□□□ 0.21
HERC2-207ENST00000564734 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms