RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SPG21Q9NZD8 308 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 ARHGAP28Q9P2N2 729 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 PUF60Q9UHX1 559 aaKnown RBP10.93□□□□□ -0.66
CDH1-206ENST00000564676 ZDHHC9Q9Y397 364 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 ATP6V1DQ9Y5K8 247 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 CARNS1A5YM72 827 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 ARL5CA6NH57 179 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 NT5C1B-RDH14C9J2C7 533 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 EDN1P05305 212 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 MLH1P40692 756 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 AFF1P51825 1210 aaKnown RBP10.92□□□□□ -0.66
CDH1-206ENST00000564676 KRT85P78386 507 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 PLCB3Q01970 1234 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 UBE3AQ05086 875 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 DCAF4L1Q3SXM0 396 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 TCEAL5Q5H9L2 206 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 DYMQ7RTS9 669 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 SLC39A11Q8N1S5 342 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 TMEM161BQ8NDZ6 487 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 MRPS27Q92552 414 aaKnown RBP10.92□□□□□ -0.66
CDH1-206ENST00000564676 PPP2R3CQ969Q6 453 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 ACO2Q99798 780 aaKnown RBP10.92□□□□□ -0.66
CDH1-206ENST00000564676 TCHPQ9BT92 498 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 TARS2Q9BW92 718 aaKnown RBP10.92□□□□□ -0.66
CDH1-206ENST00000564676 SNTG2Q9NY99 539 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 FAM13BQ9NYF5 915 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 KLK14Q9P0G3 267 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 RCOR1Q9UKL0 485 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 PCDHA7Q9UN72 937 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 TNFSF13BQ9Y275 285 aa10.92□□□□□ -0.66
CDH1-206ENST00000564676 COL6A3P12111 3177 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 A0A087X0B3 334 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 MYMKA6NI61 221 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 K7ENM7 598 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 TRAK2O60296 914 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 DDHD2O94830 711 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 ALDH2P05091 517 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 GALTP07902 379 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 MAPTP10636 758 aaKnown RBP10.91□□□□□ -0.66
CDH1-206ENST00000564676 DNAJB1P25685 340 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 IRS1P35568 1242 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 SCNN1GP51170 649 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 ZNF131P52739 623 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 CAMK1Q14012 370 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 ZNF568Q3ZCX4 644 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 AXDND1Q5T1B0 1012 aaPredicted RBP10.91□□□□□ -0.66
CDH1-206ENST00000564676 SHC4Q6S5L8 630 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 EP400NLQ6ZTU2 488 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 TAS1R3Q7RTX0 852 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 HAUS6Q7Z4H7 955 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 ZBTB33Q86T24 672 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 ZNF280BQ86YH2 543 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 FAM178BQ8IXR5 827 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 DDX12PQ92771 950 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 DHX58Q96C10 678 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 BICD1Q96G01 975 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 SPATA32Q96LK8 384 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 ZFP42Q96MM3 310 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 TLR9Q9NR96 1032 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 MIOSQ9NXC5 875 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 COG5Q9UP83 839 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 FAN1Q9Y2M0 1017 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 GDAQ9Y2T3 454 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
CDH1-206ENST00000564676 NR1I2O75469 434 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 RECQL4O94761 1208 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.66
CDH1-206ENST00000564676 IDEP14735 1019 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 MATR3P43243 847 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDH1-206ENST00000564676 OR1G1P47890 313 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 SLC11A1P49279 550 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
CDH1-206ENST00000564676 NCKAP1LP55160 1127 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 NUCB2P80303 420 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 BMS1Q14692 1282 aaKnown RBP10.9□□□□□ -0.66
CDH1-206ENST00000564676 PDE12Q6L8Q7 609 aaKnown RBP10.9□□□□□ -0.66
CDH1-206ENST00000564676 IQUBQ8NA54 791 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 HLA-CQ95604 372 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 IGSF21Q96ID5 467 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 CHAMP1Q96JM3 812 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 TMEM175Q9BSA9 504 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.66
CDH1-206ENST00000564676 LRRC27Q9C0I9 530 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 IGFLR1Q9H665 355 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 ENTPD7Q9NQZ7 604 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 DNAJB4Q9UDY4 337 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 LZTS1Q9Y250 596 aa10.9□□□□□ -0.66
CDH1-206ENST00000564676 TCHHQ07283 1943 aa10.9□□□□□ -0.67
CDH1-206ENST00000564676 PLXNA4Q9HCM2 1894 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 NRP1O14786 923 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 INPPL1O15357 1258 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 POLR2DO15514 142 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 NCK2O43639 380 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 B4GALT3O60512 393 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms