RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 ZNF622Q969S3 477 aaKnown RBP eCLIP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 VCPIP1Q96JH7 1222 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 TTC25Q96NG3 672 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 SERPINB12Q96P63 405 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 GPR101Q96P66 508 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ZSWIM1Q9BR11 485 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 LXNQ9BS40 222 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 PACSIN1Q9BY11 444 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 PHACTR1Q9C0D0 580 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DDX47Q9H0S4 455 aaKnown RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CCDC134Q9H6E4 229 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 TMEM8AQ9HCN3 771 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 UBE2TQ9NPD8 197 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 SENP1Q9P0U3 644 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 AMACRQ9UHK6 382 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ALG6Q9Y672 507 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 SCINQ9Y6U3 715 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CAPN7Q9Y6W3 813 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 MYH4Q9Y623 1939 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 RASGRF2O14827 1237 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 PLSCR1O15162 318 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 WDR46O15213 610 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 TTI1O43156 1089 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ZBED4O75132 1171 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 HIP1RO75146 1068 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ATP5HO75947 161 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 GARTP22102 1010 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 LIG3P49916 1009 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 HSD17B4P51659 736 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 CASP5P51878 434 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 RTP1P59025 263 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 PSMC6P62333 389 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 GCNT1Q02742 428 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 MAP2K1Q02750 393 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 TAP1Q03518 808 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 TCP10Q12799 353 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 CYP1B1Q16678 543 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ARHGAP44Q17R89 818 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 LACTB2Q53H82 288 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 WDR78Q5VTH9 848 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 PCNX4Q63HM2 1172 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 MSL1Q68DK7 614 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 LHX8Q68G74 356 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 SLFN12LQ6IEE8 588 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 MFSD5Q6N075 450 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 CCDC137Q6PK04 289 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ARHGEF18Q6ZSZ5 1173 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 KRT27Q7Z3Y8 459 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 KIAA0825Q8IV33 1275 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 GLIS3Q8NEA6 775 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 SPIRE2Q8WWL2 714 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 CYFIP2Q96F07 1278 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 AP1M1Q9BXS5 423 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 FRMD8P1Q9BZ68 369 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 TRIM7Q9C029 511 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 LRRC19Q9H756 370 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 PPANQ9NQ55 473 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 AVENQ9NQS1 362 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 INTS9Q9NV88 658 aaKnown RBP8.19□□□□□ -1.1
ATXN3-249ENST00000564606 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 PCDHA3Q9Y5H8 950 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ACTL7BQ9Y614 415 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ZHX2Q9Y6X8 837 aa8.19□□□□□ -1.1
ATXN3-249ENST00000564606 ESYT3A0FGR9 886 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 DDTLA6NHG4 134 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 H0YGN5 161 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 O00370 1275 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 CHMP2AO43633 222 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 CTNND1O60716 968 aaKnown RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 SUN1O94901 812 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 CYP1A2P05177 515 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 FAM153BP0C7A2 387 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 ERCC3P19447 782 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 ABCB4P21439 1286 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 TBXAS1P24557 533 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 NMT1P30419 496 aaKnown RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 RASSF2P50749 326 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 GPC3P51654 580 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 RNASE9P60153 205 aaKnown RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 YWHAEP62258 255 aaKnown RBP8.18□□□□□ -1.1
ATXN3-249ENST00000564606 CDR2Q01850 454 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 GUCY1A3Q02108 690 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 NFIAQ12857 509 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 PTP4A2Q12974 167 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 IFT88Q13099 833 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 STAT4Q14765 748 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 SURF1Q15526 300 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 SNCBQ16143 134 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 FAM153CQ494X1 144 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 EPC2Q52LR7 807 aa8.18□□□□□ -1.1
ATXN3-249ENST00000564606 BRDTQ58F21 947 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms