RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 ANKFY1Q9P2R3 1169 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 UBE4BO95155 1302 aa13.65□□□□□ -0.23
KARS-204ENST00000564578 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 UPP2O95045 317 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 GJB5O95377 273 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 AMHP03971 560 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 ATP2A2P16615 1042 aaKnown RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 KCNJ6P48051 423 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 TMEM132AQ24JP5 1023 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 ZNF568Q3ZCX4 644 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 CAVIN1Q6NZI2 390 aaKnown RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 AGMOQ6ZNB7 445 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 LPPQ93052 612 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 MEFVO15553 781 aaPredicted RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 EOMESO95936 686 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 MCF2P10911 925 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 FGFR1P11362 822 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 IBSPP21815 317 aaPredicted RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 RAB27AP51159 221 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 AFF1P51825 1210 aaKnown RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 SEZ6Q53EL9 994 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 SYCP3Q8IZU3 236 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 TRIML1Q8N9V2 468 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 ADPGKQ9BRR6 497 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 CBWD1Q9BRT8 395 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 MTIF3Q9H2K0 278 aaKnown RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
KARS-204ENST00000564578 AGPAT3Q9NRZ7 376 aa13.64□□□□□ -0.23
KARS-204ENST00000564578 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 DGKIO75912 1065 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 SKIP12755 728 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 PTMSP20962 102 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 AKAP5P24588 427 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
KARS-204ENST00000564578 DCAF4L1Q3SXM0 396 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 CLLU1OSQ5K130 101 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 CXCL16Q9H2A7 254 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 SEMA6BQ9H3T3 888 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 PCDHB7Q9Y5E2 793 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
KARS-204ENST00000564578 TNFSF9P41273 254 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 GATMP50440 423 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 PMS1P54277 932 aaKnown RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 SLFN12LQ6IEE8 588 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 CRELD2Q6UXH1 353 aaPredicted RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 THNSL1Q8IYQ7 743 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 GSTCDQ8NEC7 633 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 POMGNT1Q8WZA1 660 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 ZNF689Q96CS4 500 aaPredicted RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 SNTG2Q9NY99 539 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 TRAF3IP3Q9Y228 551 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 PDXKO00764 312 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 HARSP12081 509 aaKnown RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 GARTP22102 1010 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 GRM5P41594 1212 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 RABGGTBP53611 331 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 OSTNP61366 133 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 CENPPQ6IPU0 288 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 TMEM174Q8WUU8 243 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 ZFP42Q96MM3 310 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 MSTO1Q9BUK6 570 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 GTPBP4Q9BZE4 634 aaKnown RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 PCIF1Q9H4Z3 704 aa13.62□□□□□ -0.23
KARS-204ENST00000564578 TYW1Q9NV66 732 aaKnown RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 AGO2Q9UKV8 859 aaKnown RBP13.62□□□□□ -0.23
KARS-204ENST00000564578 A0A1W2PPC1 479 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 CLIC2O15247 247 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 OGTO15294 1046 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 OFD1O75665 1012 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 RECQL4O94761 1208 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 STAG3L1P0CL83 205 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 ITGA4P13612 1032 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 ACOT2P49753 483 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 SNRPFP62306 86 aaKnown RBP13.61□□□□□ -0.23
KARS-204ENST00000564578 DPCR1Q3MIW9 517 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 ALKAL1Q6UXT8 129 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 CASD1Q96PB1 797 aa13.61□□□□□ -0.23
KARS-204ENST00000564578 MED15Q96RN5 788 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms