RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SREBF1P36956 1147 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 ITGA1P56199 1179 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 TLE1Q04724 770 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 UBE3CQ15386 1083 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 TARBP2Q15633 366 aaKnown RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 KHDC1Q4VXA5 237 aaKnown RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 ATG4DQ86TL0 474 aaPredicted RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 MYRIPQ8NFW9 859 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 SMARCC2Q8TAQ2 1214 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 ZSCAN18Q8TBC5 510 aaPredicted RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 IFI44Q8TCB0 444 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 NT5C1BQ96P26 610 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 GORASP1Q9BQQ3 440 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 STARD7Q9NQZ5 370 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 ISM1B1AKI9 464 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 F5H423 210 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 AKR1B10O60218 316 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 IL6STP40189 918 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 MC3RP41968 323 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 ATP8B2P98198 1209 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 SNAPC2Q13487 334 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 PLS1Q14651 629 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 RAB39AQ14964 217 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 EIF4HQ15056 248 aaKnown RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 PHF19Q5T6S3 580 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 IZUMO3Q5VZ72 239 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 HEATR3Q7Z4Q2 680 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 MSL3Q8N5Y2 521 aaKnown RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 LILRA3Q8N6C8 439 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 BRI3BPQ8WY22 251 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 COLEC11Q9BWP8 271 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CNTD2Q9H8S5 307 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 BCO1Q9HAY6 547 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 PRDM16Q9HAZ2 1276 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CASS4Q9NQ75 786 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 LMBRD1Q9NUN5 540 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 GNL3LQ9NVN8 582 aaKnown RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 LUZP4Q9P127 313 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 DNAI1Q9UI46 699 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 MBD1Q9UIS9 605 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 TPCN1Q9ULQ1 816 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 RHPN2P1A8MT19 583 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 H0Y858 1186 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 PEX10O60683 326 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 KLHL18O94889 574 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 HNRNPLP14866 589 aaKnown RBP eCLIP3.18□□□□□ -1.91e-6■■■■□ 25.4
CHD9-209ENST00000564255 TNFSF4P23510 183 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CDR1P51861 262 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 TOP3AQ13472 1001 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 WDR72Q3MJ13 1102 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 ANO1Q5XXA6 986 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 TRIM68Q6AZZ1 485 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 LDHDQ86WU2 507 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 TTLL6Q8N841 843 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 OR10H5Q8NGA6 315 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 ZNF480Q8WV37 535 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CYFIP2Q96F07 1278 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 MRGPRX1Q96LB2 322 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 WDR92Q96MX6 357 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CLIC6Q96NY7 704 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 C11orf84Q9BUA3 381 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 WDCPQ9H6R7 721 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 TDP1Q9NUW8 608 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 VWA7Q9Y334 891 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 PCDHA3Q9Y5H8 950 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 NCK2O43639 380 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 PIP5K1CO60331 668 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 AMY1AP04745 511 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 NPR1P16066 1061 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 MALP21145 153 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 SESN2P58004 480 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 PRR31Q5SQ13 230 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CLEC14AQ86T13 490 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 SESTD1Q86VW0 696 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 SKAP1Q86WV1 359 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 FAM129CQ86XR2 697 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 MYLK4Q86YV6 388 aaPredicted RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 RHOT1Q8IXI2 618 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 ABI1Q8IZP0 508 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 RNF152Q8N8N0 203 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 ANKRD42Q8N9B4 389 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 KYQ8NBH2 561 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 MSLNLQ96KJ4 702 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 SYT3Q9BQG1 590 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 CRB3Q9BUF7 120 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 UNKQ9C0B0 810 aaKnown RBP3.18□□□□□ -1.9
CHD9-209ENST00000564255 KIAA1586Q9HCI6 787 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 GPRC5BQ9NZH0 403 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 TRPS1Q9UHF7 1281 aa3.18□□□□□ -1.9
CHD9-209ENST00000564255 USP19O94966 1318 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 NT5C1B-RDH14C9J2C7 533 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 NBNO60934 754 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 FTH1P19P0C7X4 201 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 TSHRP16473 764 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 ECHS1P30084 290 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 ADSLP30566 484 aaPredicted RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 PPM1AP35813 382 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 WNT3AP56704 352 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 SRSF3P84103 164 aaKnown RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 FOXO4P98177 505 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms