RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SSX2IPQ9Y2D8 614 aa26.47■■□□□ 1.83
NME3-206ENST00000564252 C2orf16Q68DN1 1984 aa26.47■■□□□ 1.83
NME3-206ENST00000564252 LRRIQ4A6NIV6 560 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 ASGR2P07307 311 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 PTPN5P54829 565 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 KIAA0319Q5VV43 1072 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 CDCA2Q69YH5 1023 aaPredicted RBP26.46■■□□□ 1.83
NME3-206ENST00000564252 PPP4R3CPQ6ZMV5 832 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 PLCD3Q8N3E9 789 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 MCPH1Q8NEM0 835 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 C8orf76Q96K31 380 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 SMOC2Q9H3U7 446 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 LIMD1Q9UGP4 676 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 PLXNA3P51805 1871 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 ZMYM2Q9UBW7 1377 aa26.46■■□□□ 1.83
NME3-206ENST00000564252 SPDYE4A6NLX3 237 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 TEX28O15482 410 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 AVPR2P30518 371 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 GLUD2P49448 558 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 TCF15Q12870 199 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 ORC2Q13416 577 aaPredicted RBP26.45■■□□□ 1.82
NME3-206ENST00000564252 POTEGQ6S5H5 508 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 PRIMPOLQ96LW4 560 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 NACC1Q96RE7 527 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 LLPHQ9BRT6 129 aaKnown RBP26.45■■□□□ 1.82
NME3-206ENST00000564252 RXFP1Q9HBX9 757 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 MAN1C1Q9NR34 630 aa26.45■■□□□ 1.82
NME3-206ENST00000564252 USP34Q70CQ2 3546 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 NR1I2O75469 434 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 ADH1AP07327 375 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 OR52Z1P0C646 297 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 DSG1Q02413 1049 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 ZNF174Q15697 407 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 C15orf39Q6ZRI6 1047 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 COLEC11Q9BWP8 271 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 FOXP1Q9H334 677 aaPredicted RBP26.44■■□□□ 1.82
NME3-206ENST00000564252 FZD8Q9H461 694 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 CHST7Q9NS84 486 aa26.44■■□□□ 1.82
NME3-206ENST00000564252 PRMT7Q9NVM4 692 aaPredicted RBP26.44■■□□□ 1.82
NME3-206ENST00000564252 RPA1P27694 616 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 GRIK3Q13003 919 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 FAM187BQ17R55 369 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 CCDC149Q6ZUS6 474 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 CMASQ8NFW8 434 aaPredicted RBP26.43■■□□□ 1.82
NME3-206ENST00000564252 BSNDQ8WZ55 320 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 PHOX2BQ99453 314 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 KLK14Q9P0G3 267 aa26.43■■□□□ 1.82
NME3-206ENST00000564252 TTLL13PA6NNM8 815 aa26.42■■□□□ 1.82
NME3-206ENST00000564252 ZBTB8OSQ8IWT0 167 aa26.42■■□□□ 1.82
NME3-206ENST00000564252 FBXO18Q8NFZ0 1043 aa26.42■■□□□ 1.82
NME3-206ENST00000564252 ERMNQ8TAM6 284 aa26.42■■□□□ 1.82
NME3-206ENST00000564252 GPR62Q9BZJ7 368 aa26.42■■□□□ 1.82
NME3-206ENST00000564252 PARP2Q9UGN5 583 aa26.42■■□□□ 1.82
NME3-206ENST00000564252 GLUD1P00367 558 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 TTC38Q5R3I4 469 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 FUT10Q6P4F1 479 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 PADI6Q6TGC4 694 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 OTOP3Q7RTS5 596 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 ACSF2Q96CM8 615 aaPredicted RBP26.41■■□□□ 1.82
NME3-206ENST00000564252 B3GALT6Q96L58 329 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 ADAM28Q9UKQ2 775 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 CACNA1HO95180 2353 aa26.41■■□□□ 1.82
NME3-206ENST00000564252 CYP11B2P19099 503 aa26.4■■□□□ 1.82
NME3-206ENST00000564252 NOSTRINQ8IVI9 506 aa26.4■■□□□ 1.82
NME3-206ENST00000564252 RABGGTAQ92696 567 aa26.4■■□□□ 1.82
NME3-206ENST00000564252 CCDC113Q9H0I3 377 aa26.4■■□□□ 1.82
NME3-206ENST00000564252 C2orf40Q9H1Z8 148 aa26.4■■□□□ 1.82
NME3-206ENST00000564252 PDZD7Q9H5P4 517 aa26.4■■□□□ 1.82
NME3-206ENST00000564252 ARHGEF35A5YM69 484 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 MUTP22033 750 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 RBM25P49756 843 aaKnown RBP26.39■■□□□ 1.82
NME3-206ENST00000564252 HMGN5P82970 282 aaKnown RBP26.39■■□□□ 1.82
NME3-206ENST00000564252 ECM1Q16610 540 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 USP41Q3LFD5 358 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 GPR65Q8IYL9 337 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 C4orf32Q8N8J7 132 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 RHOBTB2Q9BYZ6 727 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 CACNG4Q9UBN1 327 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 DPP7Q9UHL4 492 aa26.39■■□□□ 1.82
NME3-206ENST00000564252 CCDC195A0A1B0GUA6 201 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 N4BP3O15049 544 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 RFPL2O75678 378 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 EDN1P05305 212 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 NAMPTP43490 491 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 TRAPPC10P48553 1259 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 ELMSAN1Q6PJG2 1045 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 HDAC7Q8WUI4 952 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 ZSCAN31Q96LW9 406 aaPredicted RBP26.38■■□□□ 1.81
NME3-206ENST00000564252 KIF2CQ99661 725 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 PAAF1Q9BRP4 392 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.38■■□□□ 1.81
NME3-206ENST00000564252 MYO15AQ9UKN7 3530 aa26.38■■□□□ 1.81
NME3-206ENST00000564252 ACKR2O00590 384 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 PTGESO14684 152 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 N4BP1O75113 896 aaKnown RBP26.37■■□□□ 1.81
NME3-206ENST00000564252 PAPLNO95428 1278 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 C1RP00736 705 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 PRKCBP05771 671 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 MYBP10242 640 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 FXR2P51116 673 aaKnown RBP eCLIP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms