RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PPP4R3CPQ6ZMV5 832 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 PRIMPOLQ96LW4 560 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 EMILIN2Q9BXX0 1053 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 PDZD7Q9H5P4 517 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 MRPL17Q9NRX2 175 aaKnown RBP19.53■□□□□ 0.72
NME3-205ENST00000563854 DZANK1Q9NVP4 752 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 E9PMD0 336 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 N4BP3O15049 544 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 CABP7Q86V35 215 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 IGSF22Q8N9C0 903 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 RABGGTAQ92696 567 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 ADPGKQ9BRR6 497 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 HERC2P3Q9BVR0 1158 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 ADAM7Q9H2U9 754 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 FZD8Q9H461 694 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.52■□□□□ 0.72
NME3-205ENST00000563854 STK39Q9UEW8 545 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 SMC3Q9UQE7 1217 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 STK24Q9Y6E0 443 aa19.52■□□□□ 0.72
NME3-205ENST00000563854 TDRD15B5MCY1 1934 aaKnown RBP19.52■□□□□ 0.72
NME3-205ENST00000563854 LAD1O00515 517 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 INPPL1O15357 1258 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 SOD2P04179 222 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 CNPP09543 421 aaKnown RBP19.51■□□□□ 0.71
NME3-205ENST00000563854 ITIH3Q06033 890 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 DSC1Q08554 894 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 GRIK3Q13003 919 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 PDIA5Q14554 519 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 IL17AQ16552 155 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 RILPL1Q5EBL4 403 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 TAS1R1Q7RTX1 841 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 ZBTB33Q86T24 672 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 PPFIBP1Q86W92 1011 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 SLC22A17Q8WUG5 538 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 KIFAP3Q92845 792 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 KLHL5Q96PQ7 755 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 POMKQ9H5K3 350 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 SNTG2Q9NY99 539 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 CACNG4Q9UBN1 327 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 DNM3Q9UQ16 869 aa19.51■□□□□ 0.71
NME3-205ENST00000563854 EDN1P05305 212 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 PRPHP41219 470 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 GLUD2P49448 558 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 MCM2P49736 904 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 FAM187BQ17R55 369 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 EEF1DP3Q658K8 133 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 KIAA1841Q6NSI8 718 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 TMC5Q6UXY8 1006 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 FBXL18Q96ME1 805 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 RIPOR3Q96MK2 946 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 TBC1D32Q96NH3 1257 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 COLEC11Q9BWP8 271 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 CCDC113Q9H0I3 377 aa19.5■□□□□ 0.71
NME3-205ENST00000563854 CCDC169A6NNP5 214 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 ACKR2O00590 384 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 RECQL4O94761 1208 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 MYBP10242 640 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 MTHFRP42898 656 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 PEX3P56589 373 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 HFE2Q6ZVN8 426 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 GSTCDQ8NEC7 633 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 HASPINQ8TF76 798 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 EDAQ92838 391 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 FAM122AQ96E09 287 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 B3GALT6Q96L58 329 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 NECTIN4Q96NY8 510 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 GDAQ9Y2T3 454 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 NR2E1Q9Y466 385 aa19.49■□□□□ 0.71
NME3-205ENST00000563854 VWA3AA6NCI4 1184 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 CASTOR2A6NHX0 329 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 HIP1RO75146 1068 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 CLCN4P51793 760 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 EFNA5P52803 228 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 ATP2C1P98194 919 aaPredicted RBP19.48■□□□□ 0.71
NME3-205ENST00000563854 FUT10Q6P4F1 479 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 KCNK18Q7Z418 384 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 FEZF2Q8TBJ5 459 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 PLIN2Q99541 437 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 MMTAG2Q9BU76 263 aaKnown RBP19.48■□□□□ 0.71
NME3-205ENST00000563854 RUSC1Q9BVN2 902 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 SFXN1Q9H9B4 322 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 SSX2IPQ9Y2D8 614 aa19.48■□□□□ 0.71
NME3-205ENST00000563854 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.48■□□□□ 0.71
NME3-205ENST00000563854 C2CD4DB7Z1M9 353 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 ADH1AP07327 375 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 PLA2G5P39877 138 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 ZXDAP98168 799 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 DMP1Q13316 513 aaPredicted RBP19.47■□□□□ 0.71
NME3-205ENST00000563854 DCAF4L1Q3SXM0 396 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 ATAT1Q5SQI0 421 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 ATF7IP2Q5U623 682 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 LARP1BQ659C4 914 aaKnown RBP19.47■□□□□ 0.71
NME3-205ENST00000563854 GLYCTKQ8IVS8 523 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 CDK5RAP3Q96JB5 506 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 ADAM28Q9UKQ2 775 aa19.47■□□□□ 0.71
NME3-205ENST00000563854 ZMYM2Q9UBW7 1377 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 K7ERI5 159 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 TEX28O15482 410 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms