RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 SYNE3Q6ZMZ3 975 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 ANO5Q75V66 913 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 CATSPER4Q7RTX7 472 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 RHPN2Q8IUC4 686 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 KSR1Q8IVT5 923 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 SMG8Q8ND04 991 aaKnown RBP9.34□□□□□ -0.91
CKLF-208ENST00000563092 FGF14Q92915 247 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 CLDN23Q96B33 292 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 SHDQ96IW2 340 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 RPP25Q9BUL9 199 aaKnown RBP9.34□□□□□ -0.91
CKLF-208ENST00000563092 GBP3Q9H0R5 595 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 TCEAL9Q9UHQ7 104 aa9.34□□□□□ -0.91
CKLF-208ENST00000563092 COL4A3Q01955 1670 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 SPTBN2O15020 2390 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 CYP3A7-CYP3A51PA0A087WV96 503 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 SHISA7A6NL88 538 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 PRR5-ARHGAP8B1AHC4 643 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 C2CD2LO14523 706 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 TGM5O43548 720 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 GAS7O60861 476 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 CYP3A7P24462 503 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 GNA11P29992 359 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 MAGEA9P43362 315 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 ARHGAP8P85298 464 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 LMNB2Q03252 620 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 PRKCQQ04759 706 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 FZD5Q13467 585 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 MTERF2Q49AM1 385 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 Q4G0T1 1027 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 LRCH2Q5VUJ6 765 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
CKLF-208ENST00000563092 GSTCDQ8NEC7 633 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 HINFPQ9BQA5 517 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 ESYT1Q9BSJ8 1104 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 C6orf50Q9HD87 102 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 UBN1Q9NPG3 1134 aa9.33□□□□□ -0.92
CKLF-208ENST00000563092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.33□□□□□ -0.92
CKLF-208ENST00000563092 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
CKLF-208ENST00000563092 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
CKLF-208ENST00000563092 MTF2Q9Y483 593 aaPredicted RBP9.33□□□□□ -0.92
CKLF-208ENST00000563092 ARL5CA6NH57 179 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 F8W810 466 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 PRPF3O43395 683 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 ZMYND10O75800 440 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 POMCP01189 267 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 ADRB1P08588 477 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 POU2F2P09086 479 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 TDGF1P13385 188 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 RFX1P22670 979 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 ADD1P35611 737 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 RPS9P46781 194 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 FOSBP53539 338 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 PARM1Q6UWI2 310 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 SRGAP1Q7Z6B7 1085 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 CNNM3Q8NE01 707 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 ETNPPLQ8TBG4 499 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 CCDC12Q8WUD4 166 aaPredicted RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 NLRP4Q96MN2 994 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 FAM193BQ96PV7 902 aaPredicted RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 JPH2Q9BR39 696 aaPredicted RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 RTKNQ9BST9 563 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 TEKT3Q9BXF9 490 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 BCO2Q9BYV7 579 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 DHX33Q9H6R0 707 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 PRMT8Q9NR22 394 aaPredicted RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 ZSCAN32Q9NX65 697 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 MIOSQ9NXC5 875 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 CDH7Q9ULB5 785 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 SMG5Q9UPR3 1016 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 PPME1Q9Y570 386 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 MAP1BP46821 2468 aaKnown RBP9.32□□□□□ -0.92
CKLF-208ENST00000563092 ZMYM2Q9UBW7 1377 aa9.32□□□□□ -0.92
CKLF-208ENST00000563092 GOLGA8AA7E2F4 631 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 GOLGA8BA8MQT2 603 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 LAMTOR5O43504 91 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 CHMP2AO43633 222 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 TBC1D4O60343 1298 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 HNRNPA1P09651 372 aaKnown RBP eCLIP9.31□□□□□ -0.92
CKLF-208ENST00000563092 SPATA31D3P0C874 917 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 FSHRP23945 695 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 HOXA9P31269 272 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 SNW1Q13573 536 aaKnown RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 PCBP1Q15365 356 aaKnown RBP eCLIP9.31□□□□□ -0.92
CKLF-208ENST00000563092 MLF2Q15773 248 aaPredicted RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 NTRK3Q16288 839 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 SLC44A4Q53GD3 710 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 SPATA31D4Q6ZUB0 917 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 GET4Q7L5D6 327 aaPredicted RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 PALB2Q86YC2 1186 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 FBXL16Q8N461 479 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 BICD2Q8TD16 824 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 PRPF31Q8WWY3 499 aaKnown RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 GJA10Q969M2 543 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 CCDC51Q96ER9 411 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms