RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 MYBL2P10244 700 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 GSPT1P15170 499 aaKnown RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 CASRP41180 1078 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 SP140Q13342 867 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 FAM47AQ5JRC9 791 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 PPP4R3AQ6IN85 833 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 DRICH1Q6PGQ1 229 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 PNMA8AQ86V59 439 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 TMPRSS6Q8IU80 811 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 CMIPQ8IY22 773 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 CBARPQ8N350 705 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 ZNF808Q8N4W9 903 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 ZFP28Q8NHY6 868 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 SH3RF3Q8TEJ3 882 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 CASKIN2Q8WXE0 1202 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 FUBP3Q96I24 572 aaKnown RBP eCLIP3.94□□□□□ -1.78
CHD9-207ENST00000562806 UHRF1Q96T88 793 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 CPPED1Q9BRF8 314 aaPredicted RBP3.94□□□□□ -1.78
CHD9-207ENST00000562806 PRDM12Q9H4Q4 367 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 LANCL2Q9NS86 450 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 TMEM140Q9NV12 185 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 GABRDO14764 452 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 KATNA1O75449 491 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 SNRPA1P09661 255 aaKnown RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 RECQLP46063 649 aaPredicted RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 ACAP1Q15027 740 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 ACAP2Q15057 778 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 NOMO1Q15155 1222 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 CDSNQ15517 529 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 NRN1LQ496H8 165 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 USP39Q53GS9 565 aaKnown RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 RRP12Q5JTH9 1297 aaKnown RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 EFCAB2Q5VUJ9 269 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 RNF207Q6ZRF8 634 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 USP51Q70EK9 711 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 MIGA2Q7L4E1 593 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 ZNF572Q7Z3I7 529 aaPredicted RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 C1orf210Q8IVY1 113 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 PALM2Q8IXS6 379 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.93□□□□□ -1.78
CHD9-207ENST00000562806 ATXN2LQ8WWM7 1075 aaKnown RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 HDAC10Q969S8 669 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 DCLRE1CQ96SD1 692 aaKnown RBP3.93□□□□□ -1.78
CHD9-207ENST00000562806 C7orf25Q9BPX7 421 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 GPR87Q9BY21 358 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 TRIM8Q9BZR9 551 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 FAM30AQ9NZY2 134 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 TRPS1Q9UHF7 1281 aa3.93□□□□□ -1.78
CHD9-207ENST00000562806 E2F8A0AVK6 867 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 TBKBP1A7MCY6 615 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 TRIM24O15164 1050 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 XPOTO43592 962 aaKnown RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 SGTAO43765 313 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 NDUFS2O75306 463 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 SNUPNO95149 360 aaKnown RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 OSMP13725 252 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 ADSLP30566 484 aaPredicted RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 PTPN7P35236 360 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 IARSP41252 1262 aaKnown RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 ADKP55263 362 aaKnown RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 FAM50AQ14320 339 aaKnown RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 VPS72Q15906 364 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 PTPN21Q16825 1174 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 SPTY2D1Q68D10 685 aaPredicted RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 EFCAB12Q6NXP0 572 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 ELOA2Q8IYF1 753 aaPredicted RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 PQLC1Q8N2U9 271 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 CHMP4CQ96CF2 233 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 MNTQ99583 582 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 SENP6Q9GZR1 1112 aaPredicted RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 REXO4Q9GZR2 422 aaKnown RBP3.92□□□□□ -1.78
CHD9-207ENST00000562806 DNM3Q9UQ16 869 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 PCDHGA2Q9Y5H1 932 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 XDHP47989 1333 aa3.92□□□□□ -1.78
CHD9-207ENST00000562806 MT-CO1P00395 513 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 SPATA31D3P0C874 917 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 INSRRP14616 1297 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 SREBF1P36956 1147 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 RABGGTBP53611 331 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 CLRN1P58418 232 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 CCT2P78371 535 aaKnown RBP3.91□□□□□ -1.78
CHD9-207ENST00000562806 PPP3CAQ08209 521 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 FOXE3Q13461 319 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 RRP1BQ14684 758 aaKnown RBP3.91□□□□□ -1.78
CHD9-207ENST00000562806 BMT2Q1RMZ1 405 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 ABCB5Q2M3G0 1257 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 BRDTQ58F21 947 aaPredicted RBP3.91□□□□□ -1.78
CHD9-207ENST00000562806 MIIPQ5JXC2 388 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 SPDYAQ5MJ70 313 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 TMEM240Q5SV17 173 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 ARMC6Q6NXE6 501 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 SPATA31D4Q6ZUB0 917 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 GPRIN1Q7Z2K8 1008 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 DRC7Q8IY82 874 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 MIER2Q8N344 545 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 OR52N2Q8NGI0 321 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 JADE3Q92613 823 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 GPATCH3Q96I76 525 aa3.91□□□□□ -1.78
CHD9-207ENST00000562806 FAM193BQ96PV7 902 aaPredicted RBP3.91□□□□□ -1.78
CHD9-207ENST00000562806 ASPSCR1Q9BZE9 553 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms