RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PLXNA1Q9UIW2 1896 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 TEX51A0A1B0GUA7 166 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 PDHXO00330 501 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 CLSTN1O94985 981 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 SGPL1O95470 568 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 ASLP04424 464 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 ZNF853P0CG23 659 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 FLT3LGP49771 235 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 FOXO4P98177 505 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 TCP10Q12799 353 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 ZNF124Q15973 351 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 CCDC191Q8NCU4 936 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 RAET1EQ8TD07 263 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.31
UBR1-203ENST00000562173 NINJ1Q92982 152 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 DIRC2Q96SL1 478 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 PPP1R16BQ96T49 567 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 CELF4Q9BZC1 486 aaKnown RBP6.84□□□□□ -1.31
UBR1-203ENST00000562173 RNF38Q9H0F5 515 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
UBR1-203ENST00000562173 SLC6A20Q9NP91 592 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 RLFQ13129 1914 aa6.84□□□□□ -1.32
UBR1-203ENST00000562173 MYO3BQ8WXR4 1341 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 LOC285556D6RIA3 1793 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 TCRBV16S1A1N1A0A5B0 115 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 HGSO14964 777 aaPredicted RBP6.83□□□□□ -1.32
UBR1-203ENST00000562173 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
UBR1-203ENST00000562173 GNAT1P11488 350 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 IL1R1P14778 569 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 VIPR1P32241 457 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 IGFALSP35858 605 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 KCNJ4P48050 445 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 INHBEP58166 350 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 MESP2Q0VG99 397 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 TKFCQ3LXA3 575 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 CCDC184Q52MB2 194 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 MFSD14BQ5SR56 506 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 STEAP3Q658P3 488 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 OTOP3Q7RTS5 596 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 TMC6Q7Z403 805 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 UHMK1Q8TAS1 419 aaKnown RBP6.83□□□□□ -1.32
UBR1-203ENST00000562173 KLHDC4Q8TBB5 520 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 FBXW5Q969U6 566 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 MFSD3Q96ES6 412 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 FAM84AQ96KN4 292 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 CDC5LQ99459 802 aaKnown RBP6.83□□□□□ -1.32
UBR1-203ENST00000562173 IPPKQ9H8X2 491 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 PPARGC1AQ9UBK2 798 aaKnown RBP6.83□□□□□ -1.32
UBR1-203ENST00000562173 STXBP5LQ9Y2K9 1186 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 SMCHD1A6NHR9 2005 aa6.83□□□□□ -1.32
UBR1-203ENST00000562173 RASGRP1O95267 797 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 TFRCP02786 760 aaKnown RBP6.82□□□□□ -1.32
UBR1-203ENST00000562173 SDHBP21912 280 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 GLDCP23378 1020 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 FLT3P36888 993 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 IGHMBP2P38935 993 aaKnown RBP6.82□□□□□ -1.32
UBR1-203ENST00000562173 RRP1BQ14684 758 aaKnown RBP6.82□□□□□ -1.32
UBR1-203ENST00000562173 LRRC26Q2I0M4 334 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 SUPT20HL1Q3ZLR7 823 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 TREML2Q5T2D2 321 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 MIB1Q86YT6 1006 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
UBR1-203ENST00000562173 SCLYQ96I15 445 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 FAM84BQ96KN1 310 aaPredicted RBP6.82□□□□□ -1.32
UBR1-203ENST00000562173 SMOC1Q9H4F8 434 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 PCDHB4Q9Y5E5 795 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 PCDHA8Q9Y5H6 950 aa6.82□□□□□ -1.32
UBR1-203ENST00000562173 COL2A1P02458 1487 aaPredicted RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 MYOCOSA0A1B0GUC4 107 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 ZC3H12DA2A288 527 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 APAF1O14727 1248 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 TADA3O75528 432 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 DNAJC8O75937 253 aaPredicted RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 CSF1RP07333 972 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 MED14OSP0DP75 135 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 PRR5P85299 388 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 PPIL2Q13356 520 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 GCKRQ14397 625 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 TARBP2Q15633 366 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 LRRC24Q50LG9 513 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 FIGNQ5HY92 759 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 C9orf50Q5SZB4 431 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 OTUD7BQ6GQQ9 843 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 APOBEC3HQ6NTF7 200 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 KSR2Q6VAB6 950 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 ERO1BQ86YB8 467 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 TRIM48Q8IWZ4 208 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 TDRD7Q8NHU6 1098 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 CPA5Q8WXQ8 436 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 KAZALD1Q96I82 304 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.81□□□□□ -1.32
UBR1-203ENST00000562173 TTYH1Q9H313 450 aaPredicted RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 NGRNQ9NPE2 291 aaKnown RBP6.81□□□□□ -1.32
UBR1-203ENST00000562173 SIRT5Q9NXA8 310 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 MBD1Q9UIS9 605 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms