RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CWH43Q9H720 699 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 GIT1Q9Y2X7 761 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 A0A0B4J269 797 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 GOLGA6L4A6NEF3 574 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 MEFVO15553 781 aaPredicted RBP14.72□□□□□ -0.05
CDH1-204ENST00000562118 UPP2O95045 317 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 NPTXRO95502 500 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 ADRB2P07550 413 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 MYBP10242 640 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 IDEP14735 1019 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 GRM5P41594 1212 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 AFMP43652 599 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 GATMP50440 423 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 KCNA1Q09470 495 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 FAM26FQ5R3K3 315 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 ALKAL1Q6UXT8 129 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 CDR2LQ86X02 465 aaPredicted RBP14.72□□□□□ -0.05
CDH1-204ENST00000562118 GLIS3Q8NEA6 775 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 ZNF507Q8TCN5 953 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 SAMD11Q96NU1 681 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 ZNF576Q9H609 170 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 MRPL44Q9H9J2 332 aaKnown RBP14.72□□□□□ -0.05
CDH1-204ENST00000562118 RSAD1Q9HA92 442 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 LRFN2Q9ULH4 789 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
CDH1-204ENST00000562118 SPTBN5Q9NRC6 3674 aaKnown RBP14.72□□□□□ -0.05
CDH1-204ENST00000562118 ADSSP30520 456 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 POU5F1Q01860 360 aaKnown RBP14.71□□□□□ -0.05
CDH1-204ENST00000562118 PSMD2Q13200 908 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 NOLC1Q14978 699 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDH1-204ENST00000562118 POSTNQ15063 836 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 NAB2Q15742 525 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 COBLL1Q53SF7 1204 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 PPP2R2DQ66LE6 453 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 FAM117BQ6P1L5 589 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 SPRED2Q7Z698 418 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 LRRC43Q8N309 656 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 KIAA0895Q8NCT3 520 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 SCFD1Q8WVM8 642 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 LPPQ93052 612 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 ZBTB45Q96K62 511 aaPredicted RBP14.71□□□□□ -0.05
CDH1-204ENST00000562118 ADPGKQ9BRR6 497 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 ZBED2Q9BTP6 218 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 MRPL9Q9BYD2 267 aaKnown RBP14.71□□□□□ -0.05
CDH1-204ENST00000562118 SEMA6BQ9H3T3 888 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 SLC28A3Q9HAS3 691 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 RWDD3Q9Y3V2 267 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 HES2Q9Y543 173 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 MRPL42Q9Y6G3 142 aaKnown RBP14.71□□□□□ -0.05
CDH1-204ENST00000562118 COL6A3P12111 3177 aa14.71□□□□□ -0.05
CDH1-204ENST00000562118 GCNT3O95395 438 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 RPN1P04843 607 aaKnown RBP14.7□□□□□ -0.06
CDH1-204ENST00000562118 ITGA4P13612 1032 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 POU3F3P20264 500 aaPredicted RBP14.7□□□□□ -0.06
CDH1-204ENST00000562118 AFF1P51825 1210 aaKnown RBP14.7□□□□□ -0.06
CDH1-204ENST00000562118 DSC1Q08554 894 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 BTG3Q14201 252 aaPredicted RBP14.7□□□□□ -0.06
CDH1-204ENST00000562118 ZNF568Q3ZCX4 644 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 KMT5BQ4FZB7 885 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 NOMO2Q5JPE7 1267 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 ZNF697Q5TEC3 545 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 GLB1LQ6UWU2 654 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 APBB1IPQ7Z5R6 666 aaPredicted RBP14.7□□□□□ -0.06
CDH1-204ENST00000562118 HACE1Q8IYU2 909 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 FIBCD1Q8N539 461 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 HELQQ8TDG4 1101 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 P2RX5Q93086 422 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 HPS3Q969F9 1004 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 TGS1Q96RS0 853 aaKnown RBP14.7□□□□□ -0.06
CDH1-204ENST00000562118 PLVAPQ9BX97 442 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 ZHX3Q9H4I2 956 aa14.7□□□□□ -0.06
CDH1-204ENST00000562118 CARNS1A5YM72 827 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 ARL5CA6NH57 179 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 EPOPA6NHQ4 379 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 TBKBP1A7MCY6 615 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 ANKRD63C9JTQ0 380 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 PTGESO14684 152 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 HNRNPDLO14979 420 aaKnown RBP14.69□□□□□ -0.06
CDH1-204ENST00000562118 TGFB1I1O43294 461 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 B4GALT3O60512 393 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 LPXNO60711 386 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 RECQL4O94761 1208 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 EFEMP2O95967 443 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 RB1P06400 928 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 BMPR1AP36894 532 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 SNRPFP62306 86 aaKnown RBP14.69□□□□□ -0.06
CDH1-204ENST00000562118 STK4Q13043 487 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 C12orf56Q8IXR9 622 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 CEP120Q8N960 986 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 CCDC34Q96HJ3 373 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 GBP4Q96PP9 640 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 GSDMAQ96QA5 445 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 ACCSQ96QU6 501 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 C17orf80Q9BSJ5 609 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 TRIM6Q9C030 488 aaPredicted RBP14.69□□□□□ -0.06
CDH1-204ENST00000562118 IKZF4Q9H2S9 585 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 TMEM206Q9H813 350 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 TBC1D13Q9NVG8 400 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms