RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 GRAMD1CQ8IYS0 662 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 SLC39A11Q8N1S5 342 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 POF1BQ8WVV4 589 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 P2RX5Q93086 422 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 HPS3Q969F9 1004 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 MRPL38Q96DV4 380 aaKnown RBP15.28■□□□□ 0.04
TPM1-230ENST00000561266 SPATA32Q96LK8 384 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 PARVGQ9HBI0 331 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
TPM1-230ENST00000561266 TBC1D7Q9P0N9 293 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
TPM1-230ENST00000561266 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.04
TPM1-230ENST00000561266 TISP43B9A030 160 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 TRAK2O60296 914 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 GALTP07902 379 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 LAG3P18627 525 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 IGFBP6P24592 240 aaPredicted RBP15.27■□□□□ 0.04
TPM1-230ENST00000561266 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.04
TPM1-230ENST00000561266 CASP5P51878 434 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 ERVFC1P60507 584 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 NCBP1Q09161 790 aaKnown RBP15.27■□□□□ 0.04
TPM1-230ENST00000561266 KCNA1Q09470 495 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 TMEM132AQ24JP5 1023 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 SEZ6Q53EL9 994 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 ADGRD2Q7Z7M1 963 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 TMEM130Q8N3G9 435 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 CNNM3Q8NE01 707 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 GLIS3Q8NEA6 775 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 RABGGTAQ92696 567 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 KCNN1Q92952 543 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 C11orf84Q9BUA3 381 aaPredicted RBP15.27■□□□□ 0.04
TPM1-230ENST00000561266 STRA6Q9BX79 667 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 VN1R3Q9BXE9 311 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
TPM1-230ENST00000561266 GOLPH3LQ9H4A5 285 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 LARSQ9P2J5 1176 aaKnown RBP15.27■□□□□ 0.04
TPM1-230ENST00000561266 PARP2Q9UGN5 583 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 SERTAD1Q9UHV2 236 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 TBX20Q9UMR3 447 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 RWDD3Q9Y3V2 267 aa15.27■□□□□ 0.04
TPM1-230ENST00000561266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
TPM1-230ENST00000561266 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 ANKRD63C9JTQ0 380 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 K7ENM7 598 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 PTGESO14684 152 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
TPM1-230ENST00000561266 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
TPM1-230ENST00000561266 PPP1R37O75864 691 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 RECQL4O94761 1208 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 PFKFB1P16118 471 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 OSTNP61366 133 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 GTF2BQ00403 316 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 TCEAL5Q5H9L2 206 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 ADALQ6DHV7 355 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 ZNF720Q7Z2F6 126 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 COLGALT2Q8IYK4 626 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 THNSL1Q8IYQ7 743 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 ZNF558Q96NG5 402 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 MRPL4Q9BYD3 311 aaKnown RBP15.26■□□□□ 0.03
TPM1-230ENST00000561266 KCNH3Q9ULD8 1083 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 HPSEQ9Y251 543 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 GIT1Q9Y2X7 761 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 PCDHB12Q9Y5F1 795 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 ANK1P16157 1881 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 XIRP2A4UGR9 3374 aa15.26■□□□□ 0.03
TPM1-230ENST00000561266 ACTN4O43707 911 aaKnown RBP15.25■□□□□ 0.03
TPM1-230ENST00000561266 TBCAO75347 108 aaKnown RBP15.25■□□□□ 0.03
TPM1-230ENST00000561266 MYBP10242 640 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 CMA1P23946 247 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 SMTNP53814 917 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 NUCB2P80303 420 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 DSC1Q08554 894 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 NAB2Q15742 525 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 ZNF568Q3ZCX4 644 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 ZBTB41Q5SVQ8 909 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 FAM178BQ8IXR5 827 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 PAAF1Q9BRP4 392 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 MRPL9Q9BYD2 267 aaKnown RBP15.25■□□□□ 0.03
TPM1-230ENST00000561266 TRIM9Q9C026 710 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 BLZF1Q9H2G9 400 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 MARCH5Q9NX47 278 aa15.25■□□□□ 0.03
TPM1-230ENST00000561266 FAM237AA0A1B0GTK4 181 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 FSCN2O14926 492 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 FAM189A1O60320 539 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
TPM1-230ENST00000561266 IDEP14735 1019 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 AFMP43652 599 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 NDUFA8P51970 172 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 PLCB3Q01970 1234 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 RNASELQ05823 741 aaKnown RBP15.24■□□□□ 0.03
TPM1-230ENST00000561266 COASYQ13057 564 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 CUL4BQ13620 913 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 DCAF4L1Q3SXM0 396 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 MPZL3Q6UWV2 235 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 298.8 ms