RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	MORF4L1	Q9UBU8	362 aa		8.47	□□□□□ -1.05
MARK3-223	ENST00000561071	SERPINB13	Q9UIV8	391 aa		8.47	□□□□□ -1.05
MARK3-223	ENST00000561071	MRPL42	Q9Y6G3	142 aa	Known RBP	8.47	□□□□□ -1.05
MARK3-223	ENST00000561071	LOC285556	D6RIA3	1793 aa		8.46	□□□□□ -1.05
MARK3-223	ENST00000561071	CYP2D7	A0A087X1C5	515 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	BLACE	A4D250	179 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	C19orf81	C9J6K1	198 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	HMMR	O75330	724 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	FARP2	O94887	1054 aa	Predicted RBP	8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	RAC2	P15153	192 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	CYP2B6	P20813	491 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	GUCY1A2	P33402	732 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	CHRNE	Q04844	493 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	MAP4K2	Q12851	820 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	SQSTM1	Q13501	440 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	SEPT2	Q15019	361 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	SLC14A2	Q15849	920 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	ABCB5	Q2M3G0	1257 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	HLA-DQA1	Q5Y7H0	255 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	UBE2Q1	Q7Z7E8	422 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	NOP9	Q86U38	636 aa	Known RBP	8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	SPPL2C	Q8IUH8	684 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	PPIL6	Q8IXY8	311 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	SLC44A5	Q8NCS7	719 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	GPRC5A	Q8NFJ5	357 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	MYLIP	Q8WY64	445 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	PORCN	Q9H237	461 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	MCM9	Q9NXL9	1143 aa		8.46	□□□□□ -1.06
MARK3-223	ENST00000561071	FOCAD	Q5VW36	1801 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	MYH1	P12882	1939 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	TRBV23-1	A0A0A0MS06	115 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	MPHOSPH10	O00566	681 aa	Known RBP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	NRDC	O43847	1150 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	RAB11FIP3	O75154	756 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	TTF1	Q15361	905 aa	Predicted RBP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	NR0B2	Q15466	257 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	NTRK3	Q16288	839 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	CCL14	Q16627	93 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	LONRF2	Q1L5Z9	754 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	INF2	Q27J81	1249 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	ATG4D	Q86TL0	474 aa	Predicted RBP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	DIS3L	Q8TF46	1054 aa	Known RBP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	TRIB2	Q92519	343 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	GCC1	Q96CN9	775 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	DYNLL2	Q96FJ2	89 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	CRNKL1	Q9BZJ0	848 aa	Known RBP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	PAG1	Q9NWQ8	432 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	GPR160	Q9UJ42	338 aa		8.45	□□□□□ -1.06
MARK3-223	ENST00000561071	RANBP2	P49792	3224 aa	Known RBP	8.45	□□□□□ -1.06
MARK3-223	ENST00000561071		A0A1W2PQ45	241 aa	Predicted RBP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071		A0A1W2PQY0	241 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071		A0A1W2PRG0	241 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	MEFV	O15553	781 aa	Predicted RBP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	CNMD	O75829	334 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	MBD4	O95243	580 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	HMGCR	P04035	888 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	ATP5J	P18859	108 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	VCAM1	P19320	739 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	ADD2	P35612	726 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	AFM	P43652	599 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	IRAK1	P51617	712 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	GABPA	Q06546	454 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	KIAA1755	Q5JYT7	1200 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	TSHZ3	Q63HK5	1081 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	USP53	Q70EK8	1073 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	JAML	Q86YT9	394 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	CERS3	Q8IU89	383 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	SCUBE1	Q8IWY4	988 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	CCAR1	Q8IX12	1150 aa	Known RBP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	ABHD4	Q8TB40	342 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	PAWR	Q96IZ0	340 aa	Known RBP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	MMP19	Q99542	508 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	DHRS4	Q9BTZ2	278 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	RPAP3	Q9H6T3	665 aa	Predicted RBP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	CABP5	Q9NP86	173 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	DCP1A	Q9NPI6	582 aa	Predicted RBP	8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	BTBD7	Q9P203	1132 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	IMPACT	Q9P2X3	320 aa		8.44	□□□□□ -1.06
MARK3-223	ENST00000561071	ESYT3	A0FGR9	886 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	C7orf72	A4D263	438 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	PAPLN	O95428	1278 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	LCP1	P13796	627 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	AKR1B1	P15121	316 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	FXR1	P51114	621 aa	Known RBP eCLIP	8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	WDR78	Q5VTH9	848 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	CATSPERG	Q6ZRH7	1159 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	GPR142	Q7Z601	462 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	PLEKHH3	Q7Z736	793 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	SIAH1	Q8IUQ4	282 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	ZSWIM2	Q8NEG5	633 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	USP6NL	Q92738	828 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	KISS1R	Q969F8	398 aa	Predicted RBP	8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	KIRREL1	Q96J84	757 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	C12orf42	Q96LP6	360 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	HTATIP2	Q9BUP3	242 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	LRRCC1	Q9C099	1032 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	RNF32	Q9H0A6	362 aa		8.43	□□□□□ -1.06
MARK3-223	ENST00000561071	KIAA1683	Q9H0B3	1180 aa		8.43	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms