RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 CPSF3Q9UKF6 684 aaKnown RBP5.93□□□□□ -1.46
ZEB1-219ENST00000560721 POTEB3A0JP26 581 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ADCY6O43306 1168 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TBC1D4O60343 1298 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ATP9AO75110 1047 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 GGPS1O95749 300 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 DNM2P50570 870 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 UBASH3AP57075 661 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 SMAD3P84022 425 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 SLC20A2Q08357 652 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TTLL12Q14166 644 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 MRPL58Q14197 206 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 STILQ15468 1287 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 GRIK4Q16099 956 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 KNOP1Q1ED39 458 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 SNX30Q5VWJ9 437 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 POTEBQ6S5H4 581 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 DPP9Q86TI2 863 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 BRSK2Q8IWQ3 736 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TRIM59Q8IWR1 403 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 KIAA0319LQ8IZA0 1049 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 STK32AQ8WU08 396 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 CDCA3Q99618 268 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 SYT11Q9BT88 431 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 NOC4LQ9BVI4 516 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 MRPL9Q9BYD2 267 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 BCO2Q9BYV7 579 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TTYH3Q9C0H2 523 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ABCB6Q9NP58 842 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 MAN1B1Q9UKM7 699 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ITGA11Q9UKX5 1188 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 GABRQQ9UN88 632 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 M0QZQ0 153 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ZSCAN12O43309 604 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 AOC2O75106 756 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TOM1L1O75674 476 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 HOXD13P35453 343 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 UBA7P41226 1012 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ZNF132P52740 706 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 PLCB3Q01970 1234 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 CNTN2Q02246 1040 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 COASYQ13057 564 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 PSRC1Q6PGN9 363 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 INTS8Q75QN2 995 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TAS1R3Q7RTX0 852 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TC2NQ8N9U0 490 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 CELF4Q9BZC1 486 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 DNAI2Q9GZS0 605 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 AZI2Q9H6S1 392 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TOMM22Q9NS69 142 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 MRFAP1Q9Y605 127 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 CCDC66A2RUB6 948 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 MYMKA6NI61 221 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 H3BRB1 525 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 FOXN1O15353 648 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 NPTXRO95502 500 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 CFBP00751 764 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 SELPP16109 830 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 GLRA2P23416 452 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 GCNT1Q02742 428 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 STIM1Q13586 685 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 UBXN11Q5T124 520 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 PADI6Q6TGC4 694 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 RPUSD2Q8IZ73 545 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 GPR161Q8N6U8 529 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 CD99L2Q8TCZ2 262 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TUT1Q9H6E5 874 aaKnown RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 RXFP1Q9HBX9 757 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 SLC38A7Q9NVC3 462 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 WRAP73Q9P2S5 460 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-219ENST00000560721 TBX20Q9UMR3 447 aa5.92□□□□□ -1.46
ZEB1-219ENST00000560721 KBTBD13C9JR72 458 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 CES2O00748 559 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 LINC00271P0C7V0 271 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 ZNF135P52742 658 aaPredicted RBP5.91□□□□□ -1.46
ZEB1-219ENST00000560721 SMTNP53814 917 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 PPIGQ13427 754 aaKnown RBP eCLIP5.91□□□□□ -1.463e-7■■■■■ 28.4
ZEB1-219ENST00000560721 NR1I3Q14994 352 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 FBXO47Q5MNV8 452 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 MPZL3Q6UWV2 235 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 BNIPLQ7Z465 357 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 UNC93AQ86WB7 457 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 SNX29Q8TEQ0 813 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 HNRNPLLQ8WVV9 542 aaKnown RBP5.91□□□□□ -1.46
ZEB1-219ENST00000560721 PGBD4Q96DM1 585 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 DYDC2Q96IM9 177 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 SPATA33Q96N06 139 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 MED15Q96RN5 788 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 CGRRF1Q99675 332 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 NCAPGQ9BPX3 1015 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 HTATIP2Q9BUP3 242 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 MRPL4Q9BYD3 311 aaKnown RBP5.91□□□□□ -1.46
ZEB1-219ENST00000560721 XPNPEP3Q9NQH7 507 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 GJB4Q9NTQ9 266 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 TMEM161AQ9NX61 479 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.91□□□□□ -1.46
ZEB1-219ENST00000560721 CPA4Q9UI42 421 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 DSEQ9UL01 958 aa5.91□□□□□ -1.46
ZEB1-219ENST00000560721 PPP2R2CQ9Y2T4 447 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms