RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 PGBD4Q96DM1 585 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 ADPGKQ9BRR6 497 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 C17orf80Q9BSJ5 609 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 TMEM117Q9H0C3 514 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 CDT1Q9H211 546 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 CHD7Q9P2D1 2997 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 INPP5FQ9Y2H2 1132 aa17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
LYSMD2-204ENST00000560491 TDRD15B5MCY1 1934 aaKnown RBP17■□□□□ 0.31
LYSMD2-204ENST00000560491 PVALEFA0A1B0GWK0 134 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 TISP43B9A030 160 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 HOXA2O43364 376 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
LYSMD2-204ENST00000560491 LINC00271P0C7V0 271 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 SCP2P22307 547 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 LIG4P49917 911 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
LYSMD2-204ENST00000560491 DPYDQ12882 1025 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 PNOCQ13519 176 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 DCAF4L1Q3SXM0 396 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 KMT5BQ4FZB7 885 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
LYSMD2-204ENST00000560491 SLC39A4Q6P5W5 647 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 MPZL3Q6UWV2 235 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 CEP120Q8N960 986 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 TCHPQ9BT92 498 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 HAPLN2Q9GZV7 340 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 SEMA6BQ9H3T3 888 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 RSAD1Q9HA92 442 aa17■□□□□ 0.31
LYSMD2-204ENST00000560491 TRIP11Q15643 1979 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 OFD1O75665 1012 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 TOM1L1O75674 476 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 PIGRP01833 764 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 MYL1P05976 194 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 ABCD1P33897 745 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 MLH1P40692 756 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 POSTNQ15063 836 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 GPR153Q6NV75 609 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 GLB1LQ6UWU2 654 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 LRRC55Q6ZSA7 311 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 HACE1Q8IYU2 909 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 ARNTL2Q8WYA1 636 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 ZFP42Q96MM3 310 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 GAD1Q99259 594 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 KLK14Q9P0G3 267 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 PARP2Q9UGN5 583 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 GDAQ9Y2T3 454 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
LYSMD2-204ENST00000560491 CITO14578 2027 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 EPOPA6NHQ4 379 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 KINO60870 393 aaKnown RBP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 RECQL4O94761 1208 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 MCF2P10911 925 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 MATR3P43243 847 aaKnown RBP eCLIP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 OSTNP61366 133 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 ALCAMQ13740 583 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 GRIN2CQ14957 1233 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 SEZ6Q53EL9 994 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 TMEM192Q8IY95 271 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 THNSL1Q8IYQ7 743 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 LRRC43Q8N309 656 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 DEFB123Q8N688 67 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 ERCC4Q92889 916 aaPredicted RBP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 ACCSQ96QU6 501 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 TGS1Q96RS0 853 aaKnown RBP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 CXCL16Q9H2A7 254 aa16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 TYW1Q9NV66 732 aaKnown RBP16.98■□□□□ 0.31
LYSMD2-204ENST00000560491 ARL5CA6NH57 179 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 CLDN3O15551 220 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 POMCP01189 267 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 CTNNB1P35222 781 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 HOXD13P35453 343 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 ERVK-21P61565 698 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 MCL1Q07820 350 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 SPOUT1Q5T280 376 aaKnown RBP16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 EPM2AIP1Q7L775 607 aaPredicted RBP16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 KIAA0895Q8NCT3 520 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 CCDC34Q96HJ3 373 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 CWH43Q9H720 699 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 LMBRD1Q9NUN5 540 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 TBC1D13Q9NVG8 400 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 GIT1Q9Y2X7 761 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 ZMYM2Q9UBW7 1377 aa16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 PDCD11Q14690 1871 aaKnown RBP16.97■□□□□ 0.31
LYSMD2-204ENST00000560491 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms