RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PRKCBP05771 671 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 ARL2P36404 184 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 RAB27AP51159 221 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 SMTNP53814 917 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PTENP60484 403 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 KRT85P78386 507 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 DNM1Q05193 864 aaKnown RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 STRN3Q13033 797 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 GRB10Q13322 594 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PRPF4BQ13523 1007 aaKnown RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 MCM6Q14566 821 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 SLC39A14Q15043 492 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PTPAQ15257 358 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 MAPK6Q16659 721 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 RINT1Q6NUQ1 792 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 EP400NLQ6ZTU2 488 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 CDR2LQ86X02 465 aaPredicted RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 TMEM192Q8IY95 271 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 MYCT1Q8N699 235 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 URGCPQ8TCY9 931 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 HELQQ8TDG4 1101 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 KCNG4Q8TDN1 519 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 LARP4BQ92615 738 aaKnown RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 LPPQ93052 612 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PGBD4Q96DM1 585 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 BICD1Q96G01 975 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PNMA5Q96PV4 448 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 FAM193BQ96PV7 902 aaPredicted RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 ADPGKQ9BRR6 497 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 TCHPQ9BT92 498 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 MMTAG2Q9BU76 263 aaKnown RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 RUSC1Q9BVN2 902 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 GBP3Q9H0R5 595 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 MINDY3Q9H8M7 445 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 IFT122Q9HBG6 1241 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 AGPAT5Q9NUQ2 364 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 FAM105AQ9NUU6 356 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PRMT7Q9NVM4 692 aaPredicted RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 TMEM161AQ9NX61 479 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 FAM13BQ9NYF5 915 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PARP2Q9UGN5 583 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 FBXO2Q9UK22 296 aaPredicted RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 RWDD3Q9Y3V2 267 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 PCDHB12Q9Y5F1 795 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 SRPRBQ9Y5M8 271 aaKnown RBP8.82□□□□□ -1
LRRC28-219ENST00000560483 NLRC5Q86WI3 1866 aa8.82□□□□□ -1
LRRC28-219ENST00000560483 NPHP3-ACAD11A0A0J9YXS1 232 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 C9IYK1 514 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 K7ERI5 159 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 DGKIO75912 1065 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 ARHGEF15O94989 841 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 NPTXRO95502 500 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 YEATS4O95619 227 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 HARSP12081 509 aaKnown RBP8.81□□□□□ -1
LRRC28-219ENST00000560483 ITGA4P13612 1032 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 NAMPTP43490 491 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 HTRA4P83105 476 aaPredicted RBP8.81□□□□□ -1
LRRC28-219ENST00000560483 MBTD1Q05BQ5 628 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 GPM6BQ13491 265 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 PTPROQ16827 1216 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 TMEM119Q4V9L6 283 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 EPC2Q52LR7 807 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 GLB1LQ6UWU2 654 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 CCDC73Q6ZRK6 1079 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 SV2BQ7L1I2 683 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 DYMQ7RTS9 669 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 KCNK18Q7Z418 384 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 APBB1IPQ7Z5R6 666 aaPredicted RBP8.81□□□□□ -1
LRRC28-219ENST00000560483 SPRED2Q7Z698 418 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 ECHDC2Q86YB7 292 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 THNSL1Q8IYQ7 743 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 CMTR2Q8IYT2 770 aaKnown RBP8.81□□□□□ -1
LRRC28-219ENST00000560483 SYT2Q8N9I0 419 aaPredicted RBP8.81□□□□□ -1
LRRC28-219ENST00000560483 TMEM87AQ8NBN3 555 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 LINC00301Q8NCQ3 95 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 MAFAQ8NHW3 353 aaPredicted RBP8.81□□□□□ -1
LRRC28-219ENST00000560483 MICAL1Q8TDZ2 1067 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 RAD54LQ92698 747 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 SPATA32Q96LK8 384 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 SAMD11Q96NU1 681 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 TIPINQ9BVW5 301 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 STXBP5LQ9Y2K9 1186 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 PCDHB2Q9Y5E7 798 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 CDH23Q9H251 3354 aa8.81□□□□□ -1
LRRC28-219ENST00000560483 A0A0U1RQF3 1178 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 GOLGA6L4A6NEF3 574 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 K7ENM7 598 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 N4BP3O15049 544 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 SLC16A4O15374 487 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 B4GALT5O43286 388 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 SLC26A4O43511 780 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 TSPAN1O60635 241 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 CUTAO60888 179 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 ZC3H11AO75152 810 aaKnown RBP eCLIP8.8□□□□□ -1
LRRC28-219ENST00000560483 EOMESO95936 686 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 IDEP14735 1019 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 AXLP30530 894 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 NASPP49321 788 aaPredicted RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 EFNA5P52803 228 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 ERVK-21P61565 698 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms