RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 NELL1Q92832 810 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 FDXACB1Q9BRP7 624 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-215ENST00000560424 RXFP1Q9HBX9 757 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 SLC12A7Q9Y666 1083 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 SMCO2A6NFE2 343 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 FAM86B1E9PN63 330 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 DHX15O43143 795 aaKnown RBP10.38□□□□□ -0.75
SMAD3-215ENST00000560424 PRC1O43663 620 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 B4GALT3O60512 393 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 XYLBO75191 536 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 ZMYND10O75800 440 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 C1RP00736 705 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 PROS1P07225 676 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 FAM86B2P0C5J1 330 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 CCR3P51677 355 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 ANTXR2P58335 489 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 DSG1Q02413 1049 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 MTAPQ13126 283 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 WWC2Q6AWC2 1192 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 SYNE3Q6ZMZ3 975 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 AGMOQ6ZNB7 445 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 Q6ZUG5 572 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 TAS1R1Q7RTX1 841 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 SGMS1Q86VZ5 419 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 RAB11FIP4Q86YS3 637 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 C12orf50Q8NA57 414 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-215ENST00000560424 FGF13Q92913 245 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 CLDN23Q96B33 292 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 NLRP4Q96MN2 994 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 KXD1Q9BQD3 176 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 COLEC11Q9BWP8 271 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 UBN1Q9NPG3 1134 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-215ENST00000560424 TPCN1Q9ULQ1 816 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
SMAD3-215ENST00000560424 NID2Q14112 1375 aa10.38□□□□□ -0.75
SMAD3-215ENST00000560424 MTCL1Q9Y4B5 1905 aaKnown RBP10.37□□□□□ -0.75
SMAD3-215ENST00000560424 hCG_1984214I3L0E3 225 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 GDF9O60383 454 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 PFKFB2O60825 505 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 PMLP29590 882 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 NUCB2P80303 420 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 SHC2P98077 582 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 USP41Q3LFD5 358 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 PPM1LQ5SGD2 360 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 N4BP2L1Q5TBK1 243 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-215ENST00000560424 JAKMIP3Q5VZ66 844 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 TMTC3Q6ZXV5 915 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 MICU3Q86XE3 530 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 ZNF713Q8N859 430 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-215ENST00000560424 BRF1Q92994 677 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 GTF3C6Q969F1 213 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
SMAD3-215ENST00000560424 IER2Q9BTL4 223 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 DISC1Q9NRI5 854 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 HEBP1Q9NRV9 189 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 MARCH5Q9NX47 278 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 FNIP2Q9P278 1114 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 SUCLA2Q9P2R7 463 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-215ENST00000560424 COL4A3Q01955 1670 aa10.37□□□□□ -0.75
SMAD3-215ENST00000560424 RALGAPA1Q6GYQ0 2036 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 MAN2B1O00754 1011 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 SH2B2O14492 632 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-215ENST00000560424 CHMP2AO43633 222 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 HNRNPA1P09651 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMAD3-215ENST00000560424 ITGA4P13612 1032 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 RPL17P18621 184 aaKnown RBP10.36□□□□□ -0.75
SMAD3-215ENST00000560424 NTHL1P78549 312 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 ST3GAL1Q11201 340 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 DRP2Q13474 957 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 PRR16Q569H4 304 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 CLEC17AQ6ZS10 378 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 CEP68Q76N32 757 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 FANCBQ8NB91 859 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 CNNM3Q8NE01 707 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-215ENST00000560424 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-215ENST00000560424 AGPAT5Q9NUQ2 364 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
SMAD3-215ENST00000560424 IGLV3-22A0A075B6J6 115 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 CCL16O15467 120 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 ZNF862O60290 1169 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 GAS7O60861 476 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 ERLIN2O94905 339 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 PAPLNO95428 1278 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 LARGE1O95461 756 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 C8AP07357 584 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 CYP3A4P08684 503 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-215ENST00000560424 PDIA3P30101 505 aaKnown RBP10.35□□□□□ -0.75
SMAD3-215ENST00000560424 SFNP31947 248 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 CNR2P34972 360 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 AFF1P51825 1210 aaKnown RBP10.35□□□□□ -0.75
SMAD3-215ENST00000560424 JAK3P52333 1124 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 FGD1P98174 961 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 PABPC1LQ4VXU2 614 aaKnown RBP10.35□□□□□ -0.75
SMAD3-215ENST00000560424 FUT10Q6P4F1 479 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 UNQ6494/PRO21346Q6UXR6 183 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 COLGALT2Q8IYK4 626 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms