RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 A0A1W2PQ27 194 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 A0A1W2PQ64 194 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 A0A1W2PQD8 194 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 HIST1H2AGP0C0S8 130 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 HIST1H2ADP20671 130 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 MAGEA10P43363 369 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 GCKRQ14397 625 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 TERF2Q15554 542 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ADRM1Q16186 407 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ABCB5Q2M3G0 1257 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 HIST1H2AHQ96KK5 128 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 XPO6Q96QU8 1125 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 OSBPL9Q96SU4 736 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 HIST1H2AJQ99878 128 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 H2AFJQ9BTM1 129 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ANXA11P50995 505 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 KLHL17Q6TDP4 642 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 OR6P1Q8NGX9 317 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ING3Q9NXR8 418 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 SMARCAL1Q9NZC9 954 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ADAM21Q9UKJ8 722 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 CHMP2BQ9UQN3 213 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 EVPLLA8MZ36 301 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 CDC40O60508 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 MYBL1P10243 752 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 CCND1P24385 295 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 LRRC36Q1X8D7 754 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 SFR1Q86XK3 245 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 FAM47E-STBD1D6RA91 191 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 PDE9AO76083 593 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 FLT3P36888 993 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 KPNB1Q14974 876 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 PKN2Q16513 984 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 AGR3Q8TD06 166 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 XPO1O14980 1071 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 ASNA1O43681 348 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 AKAP5P24588 427 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 TAP1Q03518 808 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 UNC45BQ8IWX7 931 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 C20orf96Q9NUD7 363 aaPredicted RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 SEC24BO95487 1268 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 PSMC3P17980 439 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 RRM2P31350 389 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 PDIA2Q13087 525 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 DHX36Q9H2U1 1008 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 SERPINB13Q9UIV8 391 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 NOS1P29475 1434 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 FLT4P35916 1363 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 TCP11X1B4DZS4 312 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 MFN2O95140 757 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 SNX30Q5VWJ9 437 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 IFNL3Q8IZI9 196 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 ADAM22Q9P0K1 906 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 PLA2G4AP47712 749 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 USP14P54578 494 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 PASD1Q8IV76 773 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 TAF1DQ9H5J8 278 aaPredicted RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 RWDD3Q9Y3V2 267 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 SERPINH1P50454 418 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 OSTNP61366 133 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 C10orf53Q8N6V4 93 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 CABLES1Q8TDN4 633 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 MLXIPLQ9NP71 852 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 KLHL20Q9Y2M5 609 aa14.59□□□□□ -0.07
CSPG4P12-202ENST00000559989 CFAP99D6REC4 459 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 GNAT1P11488 350 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 MAPKAPK2P49137 400 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 PDZK1Q5T2W1 519 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 TRIQKQ629K1 86 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 BTN2A1Q7KYR7 527 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 CXorf56Q9H5V9 222 aa14.58□□□□□ -0.07
CSPG4P12-202ENST00000559989 AK9Q5TCS8 1911 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 PIPSLA2A3N6 862 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SPATA21Q7Z572 469 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SNX31Q8N9S9 440 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 IL17RAQ96F46 866 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF496Q96IT1 587 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 ATP6V1G3Q96LB4 118 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 PPP1R2P1Q96PQ5 205 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 INTS13Q9NVM9 706 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 VAMP4O75379 141 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 DSG1Q02413 1049 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 C6orf10Q5SRN2 563 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 CNDP1Q96KN2 507 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 RBBP8Q99708 897 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 TBC1D12O60347 775 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF667Q5HYK9 610 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 ANKRD40Q6AI12 368 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SETD3Q86TU7 594 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 TSEN34Q9BSV6 310 aaKnown RBP14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SYNDIG1Q9H7V2 258 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 AVENQ9NQS1 362 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 RAD18Q9NS91 495 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms