RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 HES2Q9Y543 173 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 N4BP3O15049 544 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 NPTXRO95502 500 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
SPG11-219ENST00000559822 GLUD2P49448 558 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 CLCN4P51793 760 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 PADI6Q6TGC4 694 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 FBXL6Q8N531 539 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 C12orf76Q8N812 135 aaPredicted RBP13.57□□□□□ -0.24
SPG11-219ENST00000559822 ACSF2Q96CM8 615 aaPredicted RBP13.57□□□□□ -0.24
SPG11-219ENST00000559822 ZFP42Q96MM3 310 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 GPRC5CQ9NQ84 441 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 MARCH5Q9NX47 278 aa13.57□□□□□ -0.24
SPG11-219ENST00000559822 TDRD15B5MCY1 1934 aaKnown RBP13.56□□□□□ -0.24
SPG11-219ENST00000559822 ZNF318Q5VUA4 2279 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 C2CD4DB7Z1M9 353 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 C2CD2LO14523 706 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 B4GALT5O43286 388 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 LILRB3O75022 631 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 CYP11B2P19099 503 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 NAMPTP43490 491 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.246e-8■■■□□ 16.7
SPG11-219ENST00000559822 CREMQ03060 361 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 MAPK6Q16659 721 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 TMC5Q6UXY8 1006 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 APBB1IPQ7Z5R6 666 aaPredicted RBP13.56□□□□□ -0.24
SPG11-219ENST00000559822 GPR149Q86SP6 731 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 GPR65Q8IYL9 337 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 ZDHHC14Q8IZN3 488 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 KREMEN2Q8NCW0 462 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 DEPTORQ8TB45 409 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 FZD8Q9H461 694 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPG11-219ENST00000559822 LRWD1Q9UFC0 647 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 PARP2Q9UGN5 583 aa13.56□□□□□ -0.24
SPG11-219ENST00000559822 A0A087WWV3 80 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 LAD1O00515 517 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 GLUD1P00367 558 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 C1RP00736 705 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 PRKCBP05771 671 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 AKAP5P24588 427 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 CCT6AP40227 531 aaKnown RBP13.55□□□□□ -0.24
SPG11-219ENST00000559822 EFNA5P52803 228 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 DSG1Q02413 1049 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 PRPF4BQ13523 1007 aaKnown RBP13.55□□□□□ -0.24
SPG11-219ENST00000559822 PDIA5Q14554 519 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 OTOP3Q7RTS5 596 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
SPG11-219ENST00000559822 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
SPG11-219ENST00000559822 CMASQ8NFW8 434 aaPredicted RBP13.55□□□□□ -0.24
SPG11-219ENST00000559822 KIFAP3Q92845 792 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 MIOSQ9NXC5 875 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 ADAM28Q9UKQ2 775 aa13.55□□□□□ -0.24
SPG11-219ENST00000559822 PIEZO1Q92508 2521 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 ACKR2O00590 384 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 ST18O60284 1047 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 TADA2AO75478 443 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPG11-219ENST00000559822 PTPN5P54829 565 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 NHLH1Q02575 133 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 TUSC3Q13454 348 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 KIAA0319Q5VV43 1072 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 HDAC7Q8WUI4 952 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 RHOBTB2Q9BYZ6 727 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 MAN1C1Q9NR34 630 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 CHST7Q9NS84 486 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPG11-219ENST00000559822 PHLPP2Q6ZVD8 1323 aa13.54□□□□□ -0.24
SPG11-219ENST00000559822 TEX28O15482 410 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 EFEMP2O95967 443 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 NUBP1P53384 320 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 HSP90AA2PQ14568 343 aaPredicted RBP13.53□□□□□ -0.24
SPG11-219ENST00000559822 RABEP1Q15276 862 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 DCAF4L1Q3SXM0 396 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 GSTCDQ8NEC7 633 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 STAMQ92783 540 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 KIF2CQ99661 725 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 KLK14Q9P0G3 267 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 FNIP2Q9P278 1114 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 KIAA1024Q9UPX6 916 aa13.53□□□□□ -0.24
SPG11-219ENST00000559822 DENND4AQ7Z401 1863 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms